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scnpilot_p_inoc_scaffold_1008_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1008_curated_1
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..517
-----------------
DNA (516bp)
protein (172aa)
Secreted protein containing PKD domains id=3420804 bin=GWF2_Bacteroidetes_35_48 species=uncultured Flavobacteriia bacterium genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_p_inoc_scaffold_1008_curated_2
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

982..5538
-----------------
DNA (4557bp)
protein (1519aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGY2_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44763.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_1008_curated_3
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(5619..7277)
-----------------
DNA (1659bp)
protein (553aa)
Putative sugar-transporting permease id=2717120 bin=GWF1_Flavobacteria_32_7 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
sugar-transporting permease; K02429 MFS transporter, FHS family, L-fucose permease
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_1008_curated_4
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

7335..8699
-----------------
DNA (1365bp)
protein (455aa)
DNA repair protein radA n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEH1_FLUTR
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_1008_curated_5
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8719..10257
-----------------
DNA (1539bp)
protein (513aa)
Propionyl-CoA carboxylase (EC:6.4.1.3); K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3]
Propionyl-CoA carboxylase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEC9_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_1008_curated_6
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(10369..10623)
-----------------
DNA (255bp)
protein (85aa)
Putative addiction module toxin, Txe/YoeB n=1 Tax=Cellvibrio sp. BR RepID=I3IC37_9GAMM
toxin-antitoxin system, toxin component, Txe/YoeB family
Tax=CG_Bacteroid_01
scnpilot_p_inoc_scaffold_1008_curated_7
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(10623..10937)
-----------------
DNA (315bp)
protein (105aa)
Prevent-host-death family protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KN13_SOLCM
prevent-host-death family protein
Tax=CG_Bacteroid_01
scnpilot_p_inoc_scaffold_1008_curated_8
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11051..12214)
-----------------
DNA (1164bp)
protein (388aa)
hppD; 4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27); K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z420_FLABF
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:KGO89200.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
scnpilot_p_inoc_scaffold_1008_curated_9
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12238..13398)
-----------------
DNA (1161bp)
protein (387aa)
hmgA; homogentisate 1,2-dioxygenase (EC:1.13.11.5); K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5]
Homogentisate 1,2-dioxygenase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XS35_FLAIG
Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:KGO89199.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
scnpilot_p_inoc_scaffold_1008_curated_10
unknown

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13550..13690
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1008_curated_11
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13632..14603
-----------------
DNA (972bp)
protein (324aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJS1_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_1008_curated_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14688..15533
-----------------
DNA (846bp)
protein (282aa)
MORN variant repeat-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJS0_FLUTR
MORN variant repeat-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_1008_curated_13
unknown

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comp(15643..16380)
-----------------
DNA (738bp)
protein (246aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1008_curated_14
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

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comp(16383..17051)
-----------------
DNA (669bp)
protein (223aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase id=1853934 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_40_10
scnpilot_p_inoc_scaffold_1008_curated_15
unknown

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comp(17101..17346)
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1008_curated_16
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17462..18430
-----------------
DNA (969bp)
protein (323aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIB6_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43825.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_1008_curated_17
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18487..19173
-----------------
DNA (687bp)
protein (229aa)
phosphoribosylformylglycinamidine synthase subunit I (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=755732 species=
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIB7_FLUTR
scnpilot_p_inoc_scaffold_1008_curated_18
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

19189..20463
-----------------
DNA (1275bp)
protein (425aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
Phosphoribosylamine--glycine ligase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIB8_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_1008_curated_19
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20525..21094
-----------------
DNA (570bp)
protein (190aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
phosphoribosylglycinamide formyltransferase n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002559533
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
scnpilot_p_inoc_scaffold_1008_curated_20
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21101..21700
-----------------
DNA (600bp)
protein (200aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ25_FLUTR
multiple antibiotic resistance (MarC)-like protein; K05595 multiple antibiotic resistance protein
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_1008_curated_21
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21703..23235
-----------------
DNA (1533bp)
protein (511aa)
phosphoribosylaminoimidazolecarboxamideformyl transferase (EC:2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
Phosphoribosylaminoimidazolecarboxamideformyltra nsferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ23_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_1008_curated_22
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23323..24348
-----------------
DNA (1026bp)
protein (342aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ24_FLUTR
cell shape determining protein, MreB/Mrl family; K03569 rod shape-determining protein MreB and related proteins
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:AEA43882.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_1008_curated_23
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24410..25249
-----------------
DNA (840bp)
protein (280aa)
Rod shape-determining protein MreC n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ15_FLUTR
Rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_1008_curated_24
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25246..25761
-----------------
DNA (516bp)
protein (172aa)
Rod shape-determining protein MreD n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ16_FLUTR
rod shape-determining protein MreD
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_1008_curated_25
unknown

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25813..26103
-----------------
DNA (291bp)
protein (97aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1008_curated_26
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26504..28090
-----------------
DNA (1587bp)
protein (529aa)
membrane protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000377E3B0
sulfate transporter
Sulphate transporter {ECO:0000313|EMBL:ACT94146.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1008_curated_27
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28115..28753
-----------------
DNA (639bp)
protein (213aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
carbonate dehydratase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase n=1 Tax=Imtechella halotolerans K1 RepID=I0WJQ8_9FLAO
scnpilot_p_inoc_scaffold_1008_curated_28
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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29027..30376
-----------------
DNA (1350bp)
protein (450aa)
PKD domain protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R1E1_OWEHD
Uncharacterized protein {ECO:0000313|EMBL:AIZ63635.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
PKD domain-containing protein
scnpilot_p_inoc_scaffold_1008_curated_29
unknown

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30394..30801
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1008_curated_30
unknown

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30803..31333
-----------------
DNA (531bp)
protein (177aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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