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scnpilot_p_inoc_scaffold_236_curated

Search features with annotation key words

Displaying items 61-90 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_236_curated_61
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

44395..46503
DNA (2109bp) protein (703aa)
Tex-like protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC94_FLUTR
Tex-like protein; K06959 uncharacterized protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_236_curated_62
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

46572..47792
DNA (1221bp) protein (407aa)
Alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1]
Alanine dehydrogenase {ECO:0000313|EMBL:AEA44578.1}; EC=1.4.1.1 {ECO:0000313|EMBL:AEA44578.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Alanine dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEN9_FLUTR
scnpilot_p_inoc_scaffold_236_curated_63
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

47802..48569
DNA (768bp) protein (256aa)
Monosaccharide-transporting ATPase (EC:3.6.3.17); K09697 sodium transport system ATP-binding protein
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEA44585.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEA44585.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Monosaccharide-transporting ATPase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFA0_FLUTR
scnpilot_p_inoc_scaffold_236_curated_64
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

48566..49759
DNA (1194bp) protein (398aa)
ABC-type Na+ efflux pump, permease component n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF99_FLUTR
ABC-type Na+ efflux pump, permease; K09696 sodium transport system permease protein
ABC-type Na+ efflux pump, permease component {ECO:0000313|EMBL:AEA44584.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_236_curated_65
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(49825..50895)
DNA (1071bp) protein (357aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
DNA polymerase IV n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BMB1_9BACT
DNA polymerase IV
scnpilot_p_inoc_scaffold_236_curated_66
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(50975..51157)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NU49_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF15671.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_p_inoc_scaffold_236_curated_67
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51147..51728)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGQ7_RUNSL
Zeta toxin {ECO:0000313|EMBL:KFC20640.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_236_curated_68
unknown

Not on your lists

comp(51884..52156)
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_236_curated_69
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52296..53219)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6SBS3_9FLAO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
scnpilot_p_inoc_scaffold_236_curated_70
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(53288..54448)
DNA (1161bp) protein (387aa)
Glycosyl transferase group 1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICG3_FLUTR
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEA45433.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_236_curated_71
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(54441..55610)
DNA (1170bp) protein (390aa)
Glycosyltransferase id=4368877 bin=GWF2_Ignavibacteria_33_9 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_p_inoc_scaffold_236_curated_72
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55607..57055)
DNA (1449bp) protein (483aa)
Permease YjgP/YjgQ family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICG5_FLUTR
permease YjgP/YjgQ family protein
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:AEA45435.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_236_curated_73
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(57093..57491)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID72_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45487.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_236_curated_74
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

57554..58303
DNA (750bp) protein (250aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID73_FLUTR
Isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:AEA45488.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_236_curated_75
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(58310..58552)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UES6_9CHRO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY93153.1}; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
scnpilot_p_inoc_scaffold_236_curated_76
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58571..58732)
DNA (162bp) protein (54aa)
UPF0391 membrane protein Desaf_2012 n=2 Tax=Desulfovibrio africanus RepID=F3Z397_DESAF
hypothetical protein
UPF0391 membrane protein Desaf_2012 {ECO:0000256|HAMAP-Rule:MF_01361}; Flags: Precursor;; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
scnpilot_p_inoc_scaffold_236_curated_77
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58908..60386
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035DE7F8
Chemotaxis protein CheY {ECO:0000313|EMBL:KIC96326.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
two component, sigma54 specific, transcriptional regulator, Fis family
scnpilot_p_inoc_scaffold_236_curated_78
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

60478..61902
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037E1C6B
Membrane protein {ECO:0000313|EMBL:KIC90866.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
PAS/PAC sensor hybrid histidine kinase
scnpilot_p_inoc_scaffold_236_curated_79
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

62015..62488
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L0R2_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE49544.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_236_curated_80
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

62513..62959
DNA (447bp) protein (149aa)
Putative uncharacterized protein id=4001548 bin=GWF2_Bacteroidetes_38_335 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_p_inoc_scaffold_236_curated_81
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(63076..64002)
DNA (927bp) protein (309aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJF5_FLUTR
Electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:AEA42843.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_236_curated_82
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(64021..64761)
DNA (741bp) protein (247aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJF4_FLUTR
Electron transfer flavoprotein alpha/beta-subunit; K03521 electron transfer flavoprotein beta subunit
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:AEA42842.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_236_curated_83
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

64963..65943
DNA (981bp) protein (327aa)
Pyruvate dehydrogenase (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJF3_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_236_curated_84
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(66288..66818)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RJF3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA56177.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
scnpilot_p_inoc_scaffold_236_curated_85
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(66838..67770)
DNA (933bp) protein (311aa)
Dyp-type peroxidase family n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KKS6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE65799.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
Dyp-type peroxidase; K07223 putative iron-dependent peroxidase
scnpilot_p_inoc_scaffold_236_curated_86
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

68152..68754
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G4Q4_ECHVK
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_236_curated_87
unknown

Not on your lists

68765..69634
DNA (870bp) protein (290aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_236_curated_88
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

69648..71588
DNA (1941bp) protein (647aa)
tail protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034C1E00
Phage tail sheath protein FI-like protein; K06907
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_236_curated_89
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

71618..72052
DNA (435bp) protein (145aa)
phage tail protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034BCE64
phage tail protein
Putative phage tail region protein {ECO:0000313|EMBL:EJL64867.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
scnpilot_p_inoc_scaffold_236_curated_90
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

72065..72523
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XPC1_LEEBM
phage tail protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
Displaying items 61-90 of 141 in total

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