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scnpilot_p_inoc_scaffold_14_curated

Search features with annotation key words

Displaying items 1-30 of 497 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_14_curated_1
unknown

Not on your lists

comp(2..1348)
DNA (1347bp) protein (449aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_14_curated_2
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(1902..2849)
DNA (948bp) protein (316aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID06_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_14_curated_3
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2850..3869)
DNA (1020bp) protein (340aa)
PhoH family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID05_FLUTR
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
PhoH family protein {ECO:0000313|EMBL:AEA44399.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_14_curated_4
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3970..4833
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID04_FLUTR
hypothetical protein; K09134 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44398.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_14_curated_5
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4835..5137
DNA (303bp) protein (101aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID03_FLUTR
Antibiotic biosynthesis monooxygenase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_14_curated_6
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

5152..6258
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00036DEED2
carbohydrate esterase family 1 protein; K03932 polyhydroxybutyrate depolymerase
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_14_curated_7
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6277..7431)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA61_FLUTR
hypothetical protein; K03932 polyhydroxybutyrate depolymerase
Uncharacterized protein {ECO:0000313|EMBL:AEA45238.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_14_curated_8
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7553..8257)
DNA (705bp) protein (235aa)
Oxidoreductase, FAD-binding protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VN97_9SPHI
Oxidoreductase, FAD-binding protein {ECO:0000313|EMBL:EFK57394.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
oxidoreductase FAD-binding domain-containing protein
scnpilot_p_inoc_scaffold_14_curated_9
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8337..9212)
DNA (876bp) protein (292aa)
Transcriptional regulator, AraC family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VN96_9SPHI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFK57393.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_14_curated_10
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9628..10854)
DNA (1227bp) protein (409aa)
ornithine aminotransferase (EC:2.6.1.13); K00819 ornithine--oxo-acid transaminase [EC:2.6.1.13]
Ornithine aminotransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJD6_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_14_curated_11
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10870..11499
DNA (630bp) protein (210aa)
NLP/P60 protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2III3_FLUTR
NLP/P60 protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_14_curated_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11530..11784
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIN3_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_14_curated_13
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11841..12254)
DNA (414bp) protein (138aa)
DoxX family protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QHZ8_SPILD
Contig34, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77458.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
DoxX family protein; K15977 putative oxidoreductase
scnpilot_p_inoc_scaffold_14_curated_14
unknown

Not on your lists

comp(12332..13006)
DNA (675bp) protein (225aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_14_curated_15
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13169..13687
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L789_SAPGL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC26680.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
scnpilot_p_inoc_scaffold_14_curated_16
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13771..14118)
DNA (348bp) protein (116aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDC3_FLUTR
4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:AEA45538.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_14_curated_17
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14244..17522)
DNA (3279bp) protein (1093aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IE74_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42392.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_14_curated_18
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(17578..19287)
DNA (1710bp) protein (570aa)
Surface antigen (D15) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJG6_FLUTR
surface antigen (D15)
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_14_curated_19
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19556..20314)
DNA (759bp) protein (253aa)
sulfate-transporting ATPase (EC:3.6.3.25); K02065 putative ABC transport system ATP-binding protein
Sulfate-transporting ATPase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJJ3_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_14_curated_20
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20311..21051)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJJ2_FLUTR
hypothetical protein; K02066 putative ABC transport system permease protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_14_curated_21
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21320..21952
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJJ1_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_14_curated_22
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21969..23012
DNA (1044bp) protein (348aa)
mannose-1-phosphate guanylyltransferase (GDP) (EC:2.7.7.22); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJJ0_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_14_curated_23
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23032..23676)
DNA (645bp) protein (215aa)
Methyltransferase type 11 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMS9_FLAJ1
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABQ03498.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_14_curated_24
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24091..25779
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3CA14_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EIJ40457.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
TPR repeat-containing protein
scnpilot_p_inoc_scaffold_14_curated_25
unknown

Not on your lists

26070..26369
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_14_curated_26
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26377..29052
DNA (2676bp) protein (892aa)
Ig family protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SE31_PEDSD
Ig family protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_14_curated_27

Not on your lists

comp(29524..30948)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003826875
Marine sediment metagenome DNA, contig: S01H1_L01319 {ECO:0000313|EMBL:GAF78215.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
peptidase S41
scnpilot_p_inoc_scaffold_14_curated_28
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30953..32395)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9T5_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43081.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_14_curated_29
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33234..34346
DNA (1113bp) protein (371aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ERU7_EMTOG
DEAD/DEAH box helicase domain protein
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:AFK02400.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_p_inoc_scaffold_14_curated_30
unknown

Not on your lists

34390..34542
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying items 1-30 of 497 in total

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