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scnpilot_p_inoc_scaffold_183_curated

Search features with annotation key words

Displaying items 121-146 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_183_curated_121
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(154510..154935)
DNA (426bp) protein (142aa)
Mov34/MPN/PAD-1 family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK64_NIAKG
Mov34/MPN/PAD-1 family protein
Mov34/MPN/PAD-1 family protein {ECO:0000313|EMBL:AEV96498.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_183_curated_122
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(154919..155866)
DNA (948bp) protein (316aa)
Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) {ECO:0000313|EMBL:EAY25531.1}; EC=2.5.1.47 {ECO:0000313|EMBL:EAY25531.1};; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
putative cysteine synthase B; K12339 cysteine synthase B [EC:2.5.1.47]
cysteine synthase n=1 Tax=Flexithrix dorotheae RepID=UPI000366ACAC
scnpilot_p_inoc_scaffold_183_curated_123
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(155873..156877)
DNA (1005bp) protein (335aa)
Putative membrane protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7R1_9FLAO
Putative inner membrane transporter YedA {ECO:0000313|EMBL:CEJ68625.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
hypothetical protein
scnpilot_p_inoc_scaffold_183_curated_124
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(157400..158578)
DNA (1179bp) protein (393aa)
Transporter, major facilitator family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8R3_9FLAO
Membrane protein {ECO:0000313|EMBL:KFF12982.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
putative transport protein; K08156 MFS transporter, DHA1 family, arabinose polymer transporter
scnpilot_p_inoc_scaffold_183_curated_125
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(158622..160040)
DNA (1419bp) protein (473aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XS59_PEDHD
Membrane protein {ECO:0000313|EMBL:KIA95327.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
NodT family RND efflux system outer membrane lipoprotein
scnpilot_p_inoc_scaffold_183_curated_126
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(160048..163164)
DNA (3117bp) protein (1039aa)
RND efflux system, inner membrane transporter CmeB n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVB8_9FLAO
RND efflux system, inner membrane transporter CmeB {ECO:0000313|EMBL:EIA07541.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
multidrug resistance protein. AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_p_inoc_scaffold_183_curated_127
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(163178..164323)
DNA (1146bp) protein (382aa)
Probable membrane fusion efflux lipoprotein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XUU0_FLAIG
membrane fusion efflux lipoprotein precursor; K03585 membrane fusion protein
Probable membrane fusion efflux lipoprotein {ECO:0000313|EMBL:CCG53868.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
scnpilot_p_inoc_scaffold_183_curated_128
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(164320..164919)
DNA (600bp) protein (200aa)
Regulatory protein TetR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XS62_PEDHD
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ACU03407.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_p_inoc_scaffold_183_curated_129
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(165202..165582)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EFG5_RUNSL
GxxExxY protein {ECO:0000313|EMBL:KJF44207.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_183_curated_130
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(165901..166281)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EFG5_RUNSL
GxxExxY protein {ECO:0000313|EMBL:KJF44207.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_183_curated_131
unknown

Not on your lists

comp(166494..167375)
DNA (882bp) protein (294aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_183_curated_132
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(167372..168547)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI0003707413
Lipoprotein {ECO:0000313|EMBL:AIZ64965.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
hypothetical protein
scnpilot_p_inoc_scaffold_183_curated_133
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168750..169088)
DNA (339bp) protein (113aa)
Putative transcriptional regulator n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CH27_9FLAO
Transcription factor, MBF1 {ECO:0000313|EMBL:BAP55089.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
scnpilot_p_inoc_scaffold_183_curated_134
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

169299..171341
DNA (2043bp) protein (681aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKE5_FLUTR
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEA45071.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_183_curated_135
unknown

Not on your lists

171342..172862
DNA (1521bp) protein (507aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_183_curated_136
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(172935..173738)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPH8_SOLCM
short-chain dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AFD05876.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_183_curated_137
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(174157..174477)
DNA (321bp) protein (107aa)
Phosphoribosylpyrophosphate synthetase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9X4_PEDSD
phosphoribosylpyrophosphate synthetase
Phosphoribosylpyrophosphate synthetase {ECO:0000313|EMBL:ADY52532.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_p_inoc_scaffold_183_curated_138
unknown

Not on your lists

comp(174860..175726)
DNA (867bp) protein (289aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_183_curated_139
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(175803..176240)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1LXV5_9FLAO
Strain DSM 12611 Contig07, whole genome shotgun sequence {ECO:0000313|EMBL:KIO53318.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_183_curated_140
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(176430..178586)
DNA (2157bp) protein (719aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Polyribonucleotide nucleotidyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICB5_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_183_curated_141
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(178668..178937)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J4L6_9FLAO
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
scnpilot_p_inoc_scaffold_183_curated_142
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(179042..179950)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB54_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42137.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_183_curated_143
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(179940..180923)
DNA (984bp) protein (328aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKF0_FLUTR
Succinylglutamate desuccinylase/aspartoacylase; K06987
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:AEA45076.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_183_curated_144
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(180923..181804)
DNA (882bp) protein (294aa)
SSU ribosomal protein S6P modification protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKE9_FLUTR
30S ribosomal protein S6P modification protein; K05844 ribosomal protein S6 modification protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_183_curated_145
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(181801..182241)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKE8_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45074.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_183_curated_146
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(182328..182474)
DNA (147bp) protein (49aa)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
Displaying items 121-146 of 146 in total

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