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scnpilot_p_inoc_scaffold_183_curated_128

Organism: scnpilot_dereplicated_Flavobacteriia_1

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(164320..164919)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XS62_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 202.0
  • Bit_score: 150
  • Evalue 2.00e-33
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 202.0
  • Bit_score: 150
  • Evalue 6.20e-34
Regulatory protein TetR {ECO:0000313|EMBL:ACU03407.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 202.0
  • Bit_score: 150
  • Evalue 2.80e-33

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 600
ATGTCAAGTCAACTAAGCGAAACGGAACAGCTGATTATTTCCAAATCCAAACAGTTGTTTTACGAAGAAGGAAATATCAAGGCAACCTGTCAGGAAATTGCCGATTTTTCCGGAGTTCAGCGCACTTTGGTGAATTATTATTTTCGCTCAAAAGACAACCTGGTCAGAATTGCACATGCTGAAATTATTGCAGAAATGCATGAAGGATTGCACGGGATTTATACCGGAATAACCATCCCTTTTGAAGAGAAAATTGAACGGTTGATTGATTTTACCTTTACATTCAAACGGAAATATCCATATTTTGAAGTGTTTAATATTATCAGGTCCAATAACCTGATCGATGAAAATCTGTTTCTCAAACCTCAGACTACAAATGAGATGCGGGAATTCCTTAAACAGATTCAGGAGCAGATGGACAGAGGTGTGATACGAAGATCCAATCCGATCAATTTTGTTCTGAATATTTTTTCGCTTGTGTCGTATCCTTTGGTCATGAAAGGAATTTTCAAAGATGTTTTTGACTTGTCGGAAGACGAGTTTGAACAAATTTTACAGGAAAGAAAAGAGTTAATTAAAAATTTAATTTTCAATAAATGA
PROTEIN sequence
Length: 200
MSSQLSETEQLIISKSKQLFYEEGNIKATCQEIADFSGVQRTLVNYYFRSKDNLVRIAHAEIIAEMHEGLHGIYTGITIPFEEKIERLIDFTFTFKRKYPYFEVFNIIRSNNLIDENLFLKPQTTNEMREFLKQIQEQMDRGVIRRSNPINFVLNIFSLVSYPLVMKGIFKDVFDLSEDEFEQILQERKELIKNLIFNK*