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scnpilot_p_inoc_scaffold_25_curated

Search features with annotation key words

Displaying items 271-300 of 667 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_25_curated_271
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

315361..315834
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II04_FLUTR
transcription elongation factor GreA; K03624 transcription elongation factor GreA
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_25_curated_272
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

315837..316226
DNA (390bp) protein (130aa)
Histidine triad (HIT) protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II03_FLUTR
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_273
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

316287..318170
DNA (1884bp) protein (628aa)
Leukotriene-A(4) hydrolase (EC:3.3.2.6)
Leukotriene-A(4) hydrolase {ECO:0000313|EMBL:AEA44370.1}; EC=3.3.2.6 {ECO:0000313|EMBL:AEA44370.1};; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Leukotriene-A(4) hydrolase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICC4_FLUTR
scnpilot_p_inoc_scaffold_25_curated_274
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

318197..319420
DNA (1224bp) protein (408aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000313|EMBL:AEA45912.1}; EC=1.17.1.2 {ECO:0000313|EMBL:AEA45912.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHV3_FLUTR
scnpilot_p_inoc_scaffold_25_curated_275
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

319422..320102
DNA (681bp) protein (227aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
ribosomal large subunit pseudouridine synthase D n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D58C8
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_25_curated_276
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

320212..322395
DNA (2184bp) protein (728aa)
glutamate--ammonia ligase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2]
Glutamate--ammonia ligase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHV4_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_277
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

322614..323294
DNA (681bp) protein (227aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PLJ8_MURRD
two component winged helix family transcriptional regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEM70030.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
scnpilot_p_inoc_scaffold_25_curated_278
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

323393..324037
DNA (645bp) protein (215aa)
Putative phosphate transport regulator n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBK3_FLUTR
putative phosphate transport regulator; K07220 hypothetical protein
Putative phosphate transport regulator {ECO:0000313|EMBL:AEA44311.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_25_curated_279
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

324048..325496
DNA (1449bp) protein (483aa)
Phosphate transporter n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBK2_FLUTR
phosphate transporter; K03306 inorganic phosphate transporter, PiT family
Phosphate transporter {ECO:0000313|EMBL:AEA44310.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_25_curated_280
unknown

Not on your lists

comp(325650..325757)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_25_curated_281
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

325821..327965
DNA (2145bp) protein (715aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II11_FLUTR
PKD domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_282
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

328092..329159
DNA (1068bp) protein (356aa)
phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52]
Phosphoserine aminotransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDZ9_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_283
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

329161..330117
DNA (957bp) protein (319aa)
phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
Phosphoglycerate dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IE00_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_284
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

330259..331479
DNA (1221bp) protein (407aa)
Uncharacterized conserved protein UCP033563 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IE01_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_285
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

331476..332129
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IE02_FLUTR
hypothetical protein; K06997
Uncharacterized protein {ECO:0000313|EMBL:AEA45566.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_25_curated_286
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

332642..333259
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHJ1_FLUTR
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEA43756.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_25_curated_287
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

333252..334514
DNA (1263bp) protein (421aa)
Outer membrane efflux protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHJ0_FLUTR
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AEA43755.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_25_curated_288
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

334555..335637
DNA (1083bp) protein (361aa)
Secretion protein HlyD family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHI9_FLUTR
secretion protein HlyD family protein; K03543 multidrug resistance protein A
Secretion protein HlyD family protein {ECO:0000313|EMBL:AEA43754.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_25_curated_289
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

335643..337220
DNA (1578bp) protein (526aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHI8_FLUTR
drug resistance transporter, EmrB/QacA subfamily; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:AEA43753.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_25_curated_290
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(337311..337613)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Pseudomonas chlororaphis O6 RepID=I4XT58_9PSED
Uncharacterized protein {ECO:0000313|EMBL:AIC20155.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_291
unknown

Not on your lists

337976..338488
DNA (513bp) protein (171aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_25_curated_292
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

338500..339144
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAA7_9SPHI
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_293
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

339144..339944
DNA (801bp) protein (267aa)
histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B63122
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_294
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

339954..340625
DNA (672bp) protein (224aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAA5_9SPHI
two component transcriptional regulator, LuxR family
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_295
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

340701..341474
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/isomerase; K13766 methylglutaconyl-CoA hydratase [EC:4.2.1.18]
Enoyl-CoA hydratase/isomerase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID57_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_25_curated_296
Weeksella virosa, Weeksella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

341735..342151
DNA (417bp) protein (139aa)
cytochrome C oxidase subunit II n=1 Tax=Empedobacter brevis RepID=UPI000374851F
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADX68590.1}; TaxID=865938 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Weeksella.;" source="Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC; 16016 / NCTC 11634 / CL345/78).;"
scnpilot_p_inoc_scaffold_25_curated_297
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists


342262..342717
DNA (456bp) protein (152aa)
50S ribosomal protein L13 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDR6_FLUTR
50S ribosomal protein L13P; K02871 large subunit ribosomal protein L13
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_25_curated_298
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


342720..343106
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDR7_FLUTR
30S ribosomal protein S9P; K02996 small subunit ribosomal protein S9
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_299
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


343224..343961
DNA (738bp) protein (246aa)
30S ribosomal protein S2 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDR8_FLUTR
30S ribosomal protein S2P; K02967 small subunit ribosomal protein S2
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_300
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

343984..344814
DNA (831bp) protein (277aa)
Elongation factor Ts n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDR9_FLUTR
translation elongation factor Ts (EF-Ts); K02357 elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Displaying items 271-300 of 667 in total

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