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scnpilot_p_inoc_scaffold_25_curated

Search features with annotation key words

Displaying items 1-30 of 667 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_25_curated_1
unknown

Not on your lists

comp(1..183)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_25_curated_2
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(394..1416)
DNA (1023bp) protein (341aa)
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_3
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1559..3478
DNA (1920bp) protein (640aa)
Amino acid-transporting permease n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RY43_9FLAO
Amino acid-transporting permease {ECO:0000313|EMBL:ESU18947.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
amino acid permease-associated protein
scnpilot_p_inoc_scaffold_25_curated_4
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


3524..4873
DNA (1350bp) protein (450aa)
Signal recognition particle protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIE6_FLUTR
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_5
unknown

Not on your lists

comp(4934..5284)
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_25_curated_6
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5405..6070
DNA (666bp) protein (222aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27]
Uracil-DNA glycosylase n=1 Tax=Flavobacterium sp. F52 RepID=J1AJ67_9FLAO
scnpilot_p_inoc_scaffold_25_curated_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6077..6661)
DNA (585bp) protein (195aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
Phosphoheptose isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ5_NIAKG
scnpilot_p_inoc_scaffold_25_curated_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6724..7857)
DNA (1134bp) protein (378aa)
Glycosyl transferase group 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ3_NIAKG
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEV98886.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_25_curated_9
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8379..9830
DNA (1452bp) protein (484aa)
Integrase family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3B9_DYAFD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACT92223.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_25_curated_10
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9875..10096)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DTC9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EOZ95346.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
scnpilot_p_inoc_scaffold_25_curated_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10093..10392)
DNA (300bp) protein (100aa)
hypothetical protein MsalJ2_18438 id=4369761 bin=GWC2_Bacteroidetes_46_850 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
DNA-binding protein
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_p_inoc_scaffold_25_curated_12
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10434..10718)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVT0_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07411.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_13
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10737..11774)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KXZ0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF13738.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_14
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11841..13031)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003664053
Uncharacterized protein {ECO:0000313|EMBL:KFF17737.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_15
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13037..13891)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT4_ZUNPS
Uncharacterized protein {ECO:0000313|EMBL:KFF13740.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_16
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13918..15147)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT3_ZUNPS
hypothetical protein
Conjugal transfer protein TraM {ECO:0000313|EMBL:KGO80814.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
scnpilot_p_inoc_scaffold_25_curated_17
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15158..15601)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT2_ZUNPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADF53780.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_p_inoc_scaffold_25_curated_18
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15614..16234)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT1_ZUNPS
hypothetical protein
Conjugal transfer protein {ECO:0000313|EMBL:KGO80812.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
scnpilot_p_inoc_scaffold_25_curated_19
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16266..17306)
DNA (1041bp) protein (347aa)
Bacteroides conjugative transposon TraJ-like protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBR0_FLAJ1
Conjugal transfer protein TraJ {ECO:0000313|EMBL:KFF16584.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
TraJ family protein conjugative transposon
scnpilot_p_inoc_scaffold_25_curated_20
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17313..17957)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJS9_ZUNPS
Uncharacterized protein {ECO:0000313|EMBL:KGO80810.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_21
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17976..18596)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KYZ7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KDN54672.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_22
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18609..19289)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJS7_ZUNPS
Conjugal transfer protein TraI {ECO:0000313|EMBL:KGO80808.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_23
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19302..21767)
DNA (2466bp) protein (822aa)
Type IV secretory pathway VirB4 components-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJS6_ZUNPS
Conjugal transfer protein TraG {ECO:0000313|EMBL:KGO80807.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
type IV secretory pathway VirB4 components-like protein
scnpilot_p_inoc_scaffold_25_curated_24
unknown

Not on your lists

comp(21867..22688)
DNA (822bp) protein (274aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_25_curated_25
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22754..23254)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZY0_9FLAO
Strain DSM 12611 Contig03, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54363.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_26
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23211..23585)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003619F68
Uncharacterized protein {ECO:0000313|EMBL:KGO93669.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_27
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23590..24381)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YHX0_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ25518.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_p_inoc_scaffold_25_curated_28
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24409..30054)
DNA (5646bp) protein (1882aa)
Putative DNA methylase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJS4_ZUNPS
Putative DNA methylase {ECO:0000313|EMBL:ADF53772.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
DNA methylase
scnpilot_p_inoc_scaffold_25_curated_29
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30099..30527)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJS3_ZUNPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADF53771.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_p_inoc_scaffold_25_curated_30
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30545..30883)
DNA (339bp) protein (113aa)
carbamoyl phosphate synthetase n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002D65429
Carbamoyl phosphate synthetase {ECO:0000313|EMBL:KFF16578.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
Displaying items 1-30 of 667 in total

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