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scnpilot_p_inoc_scaffold_25_curated

Search features with annotation key words

Displaying items 31-60 of 667 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_25_curated_31
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31193..31663)
DNA (471bp) protein (157aa)
Putative uncharacterized protein id=1829077 bin=GWE2_Bacteroidetes_29_8 species=Zunongwangia profunda genus=Zunongwangia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KGO80802.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_32
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31987..32454
DNA (468bp) protein (156aa)
DNA repair protein RadC n=1 Tax=Myroides odoratimimus CCUG 3837 RepID=K1HM58_9FLAO
DNA repair protein {ECO:0000313|EMBL:KFF03279.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
DNA repair protein RadC
scnpilot_p_inoc_scaffold_25_curated_33
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32482..33432)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJR9_ZUNPS
Uncharacterized protein {ECO:0000313|EMBL:KGO80800.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_34
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

comp(33791..35110)
DNA (1320bp) protein (440aa)
LexA DNA-binding protein id=1887617 bin=GWE2_Bacteroidetes_42_42 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
LexA DNA-binding protein
Tax=GWF2_Bacteroidetes_43_63_curated
scnpilot_p_inoc_scaffold_25_curated_35
unknown

Not on your lists

comp(35175..35408)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_25_curated_36
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35504..36106
DNA (603bp) protein (201aa)
RNA polymerase sigma-70 factor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYS8_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:AIM39034.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
RNA polymerase sigma-70 factor
scnpilot_p_inoc_scaffold_25_curated_37
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36156..37211
DNA (1056bp) protein (352aa)
Anti-FecI sigma factor, FecR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDW2_9SPHI
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:EHQ24302.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
anti-FecI sigma factor FecR
scnpilot_p_inoc_scaffold_25_curated_38
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

37335..40877
DNA (3543bp) protein (1181aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0B2_9FLAO
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFK36073.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
SusC/RagA family TonB-linked outer membrane protein
scnpilot_p_inoc_scaffold_25_curated_39
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

40888..42246
DNA (1359bp) protein (453aa)
RagB/SusD family protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G020_ECHVK
RagB/SusD family protein
RagB/SusD family protein {ECO:0000313|EMBL:AGA78225.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_p_inoc_scaffold_25_curated_40
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

42259..43743
DNA (1485bp) protein (495aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EFK36071.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EFK36071.1};; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
Antioxidant, AhpC/TSA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0B0_9FLAO
alkyl hydroperoxide reductase
scnpilot_p_inoc_scaffold_25_curated_41
unknown

Not on your lists

comp(43791..44060)
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_25_curated_42
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44164..44631)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2R9_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU03132.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_p_inoc_scaffold_25_curated_43
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(44932..45774)
DNA (843bp) protein (281aa)
Response regulator of the LytR/AlgR family n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FYU0_ECHVK
response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:AGA78208.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_p_inoc_scaffold_25_curated_44
unknown

Not on your lists

45938..46321
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_25_curated_45
unknown

Not on your lists

comp(46361..46636)
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_25_curated_46
unknown

Not on your lists

comp(46666..47103)
DNA (438bp) protein (146aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_25_curated_47
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47116..54294)
DNA (7179bp) protein (2393aa)
YD repeat protein n=1 Tax=Frankia sp. CN3 RepID=G6HAX4_9ACTO
Rhs family protein
Rhs family protein {ECO:0000313|EMBL:CAN98730.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
scnpilot_p_inoc_scaffold_25_curated_48
Crocosphaera watsonii, Crocosphaera, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(54353..64318)
DNA (9966bp) protein (3322aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034B651D
Uncharacterized protein {ECO:0000313|EMBL:EHJ13972.1}; TaxID=423471 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Crocosphaera.;" source="Crocosphaera watsonii WH 0003.;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_49
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(64701..65522)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZY0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KEQ30190.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
scnpilot_p_inoc_scaffold_25_curated_50
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(65607..65897)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003735665
Uncharacterized protein {ECO:0000313|EMBL:KGO80783.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_51
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

66364..66753
DNA (390bp) protein (130aa)
Mobilisation protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJP1_ZUNPS
mobilisation protein
Mobilization protein {ECO:0000313|EMBL:KGO80780.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
scnpilot_p_inoc_scaffold_25_curated_52
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

66741..68039
DNA (1299bp) protein (433aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJP0_ZUNPS
Relaxase {ECO:0000313|EMBL:KGO80779.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
relaxase/mobilization nuclease
scnpilot_p_inoc_scaffold_25_curated_53
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

68051..70036
DNA (1986bp) protein (662aa)
Type IV secretory pathway VirD4 components-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJN9_ZUNPS
Conjugal transfer protein TraG {ECO:0000313|EMBL:KIA82523.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
type IV secretory pathway VirD4 components-like protein
scnpilot_p_inoc_scaffold_25_curated_54
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

70075..72729
DNA (2655bp) protein (885aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG89_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45755.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_25_curated_55
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

72753..75026
DNA (2274bp) protein (758aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6M7_ACIC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO32646.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
scnpilot_p_inoc_scaffold_25_curated_56
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(75235..77430)
DNA (2196bp) protein (732aa)
Helicase C-terminal domain protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7LR90_BACOV
Helicase C-terminal domain protein {ECO:0000313|EMBL:EDO14026.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
superfamily II helicase
scnpilot_p_inoc_scaffold_25_curated_57
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(77427..78269)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7LR89_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO14025.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_58
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

78768..79169
DNA (402bp) protein (134aa)
Single-stranded DNA-binding protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FS13_9SPHI
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
single-strand binding protein; K03111 single-strand DNA-binding protein
scnpilot_p_inoc_scaffold_25_curated_59
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

79203..80246
DNA (1044bp) protein (348aa)
Phage/plasmid-related protein TIGR03299 n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G302_ECHVK
phage/plasmid-like protein
Phage/plasmid-related protein TIGR03299 {ECO:0000313|EMBL:AGA79376.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_p_inoc_scaffold_25_curated_60
unknown

Not on your lists

80269..80547
DNA (279bp) protein (93aa)

This feature has no annotations

Displaying items 31-60 of 667 in total

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