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scnpilot_p_inoc_scaffold_25_curated_36

Organism: scnpilot_dereplicated_Flavobacteriia_1

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 35504..36106

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYS8_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 36.0
  • Coverage: 200.0
  • Bit_score: 152
  • Evalue 5.20e-34
Uncharacterized protein {ECO:0000313|EMBL:AIM39034.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 193.0
  • Bit_score: 159
  • Evalue 6.00e-36
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 200.0
  • Bit_score: 152
  • Evalue 1.60e-34

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Taxonomy

Sphingobacterium sp. ML3W → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 603
ATGCCTACTACTGCTCATATCGACGAAATGGATTTATTGCTCCGGCTCAACCGGGGCGATGCACAGGCATTTCACGTACTGTATGAGCGATATAAAACGGCACTGGCCGCAAAACTCCTTAAACTTCTGAAATCGGATGATCTGGTCGAGGACACCTTGCAGGATGTCTTCTTAAAACTTTGGGAATACCGTAGCCAGATCGACGCACAGCGTACATTTGCACCACTGCTGTACCAGATGGCACGCAACAAGGTCACTGATCTGTACCGCAAAGCATACCGGGACATGAGCCTGCGCGAACAGTTATCCTACGACGGTACTGCCGTACAGGAACCTGTAGATCACCGCATCATTGATCGCGAAGAAATGGCAGTACTCCAAAAAGCATTGGAGCGCCTGCCGGCACGACAACGCGAAGTGTTCACCCTGCACAAGATCGAAGGCAAAAGCTATAAAGAGATCAGCGAAATGCTGTCTATCAGCCATGCGGCGATCAATCAGCATATCTACCGTGCCACACAGTCCCTCAATCAGACGTTACAACCCAATGTACAGGTTACACTGGCGTGTCTGGCAGGTATGGCAGCACTATATCTTTCCTAA
PROTEIN sequence
Length: 201
MPTTAHIDEMDLLLRLNRGDAQAFHVLYERYKTALAAKLLKLLKSDDLVEDTLQDVFLKLWEYRSQIDAQRTFAPLLYQMARNKVTDLYRKAYRDMSLREQLSYDGTAVQEPVDHRIIDREEMAVLQKALERLPARQREVFTLHKIEGKSYKEISEMLSISHAAINQHIYRATQSLNQTLQPNVQVTLACLAGMAALYLS*