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scnpilot_p_inoc_scaffold_25_curated

Search features with annotation key words

Displaying items 481-510 of 667 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_25_curated_481
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

553037..553999
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9N3_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_482
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

553999..555945
DNA (1947bp) protein (649aa)
TonB-dependent receptor plug n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9N4_FLUTR
TonB-dependent receptor plug
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_483
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

555935..556999
DNA (1065bp) protein (355aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA93_FLUTR
40-residue YVTN family beta-propeller repeat-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_484
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

556992..557993
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Psychroflexus tropicus RepID=UPI00037AC0C8
Secretion protein {ECO:0000313|EMBL:KIX22220.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_485
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(558014..558568)
DNA (555bp) protein (185aa)
Phosphoglycerate mutase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7J5_9FLAO
Phosphoglycerate mutase {ECO:0000313|EMBL:BAP30525.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
phosphoglycerate mutase
scnpilot_p_inoc_scaffold_25_curated_486
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(558553..559353)
DNA (801bp) protein (267aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
cobalamin synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
Cobalamin synthase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7J6_9FLAO
scnpilot_p_inoc_scaffold_25_curated_487
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(559343..560350)
DNA (1008bp) protein (336aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
Nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0P1D1_WEEVC
scnpilot_p_inoc_scaffold_25_curated_488
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(560700..562721)
DNA (2022bp) protein (674aa)
Site-specific recombinase Gcr n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S8I7_9FLAO
Site-specific recombinase Gcr {ECO:0000313|EMBL:ESU23013.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
site-specific recombinase Gcr
scnpilot_p_inoc_scaffold_25_curated_489
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

562780..564594
DNA (1815bp) protein (605aa)
AAA ATPase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGH0_CHIPD
ATPase AAA
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_25_curated_490
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(564859..565821)
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6ELQ8_9BACT
membrane protein
Tax=BJP_IG2102_Flavobacteriales_34_12
scnpilot_p_inoc_scaffold_25_curated_491
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(565818..566207)
DNA (390bp) protein (130aa)
Gliding motility-associated C-terminal domain-containing protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C6G0_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ41650.1}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga baltica 18.;"
scnpilot_p_inoc_scaffold_25_curated_492
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(566288..567004)
DNA (717bp) protein (239aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase n=2 Tax=Myroides RepID=H1ZBK9_MYROD
scnpilot_p_inoc_scaffold_25_curated_493
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(566971..568026)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGV8_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_494
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(568198..568809)
DNA (612bp) protein (204aa)
Methyltransferase type 11 n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5W1_SPHS2
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADZ80126.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_25_curated_495
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(568813..570261)
DNA (1449bp) protein (483aa)
Rhodanese domain protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RRQ2_LEAB4
rhodanese domain protein
Rhodanese domain protein {ECO:0000313|EMBL:ADQ16708.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_25_curated_496
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

570480..572264
DNA (1785bp) protein (595aa)
DEAD/DEAH box helicase domain-containing protein; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
DEAD/DEAH box helicase domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGA2_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_497
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

572293..574089
DNA (1797bp) protein (599aa)
GTP-binding protein TypA n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGA1_FLUTR
GTP-binding protein TypA; K06207 GTP-binding protein
GTP-binding protein TypA {ECO:0000313|EMBL:AEA45767.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_25_curated_498
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

574153..575559
DNA (1407bp) protein (469aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IER3_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_25_curated_499
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

575568..576386
DNA (819bp) protein (273aa)
phosphosulfolactate synthase (EC:4.4.1.19); K08097 phosphosulfolactate synthase [EC:4.4.1.19]
Phosphosulfolactate synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IER2_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_500
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(576558..577814)
DNA (1257bp) protein (419aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CDJ1_9LEPT
TPR repeat protein {ECO:0000313|EMBL:GAO29651.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
hypothetical protein
scnpilot_p_inoc_scaffold_25_curated_501
unknown

Not on your lists

comp(578021..578464)
DNA (444bp) protein (148aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_25_curated_502
Ancylostoma ceylanicum, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

578712..579581
DNA (870bp) protein (290aa)
WD40 repeat-containing protein n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M9B5_9CYAN
WD domain, G-beta repeat protein {ECO:0000313|EMBL:EPB65537.1}; TaxID=53326 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma.;" source="Ancylostoma ceylanicum.;"
hypothetical protein; K10259 F-box and WD-40 domain protein MET30
scnpilot_p_inoc_scaffold_25_curated_503
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(579578..580891)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036EA025
hypothetical protein
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_p_inoc_scaffold_25_curated_504
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(580973..583672)
DNA (2700bp) protein (900aa)
Surface antigen (D15) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICA9_FLUTR
surface antigen (D15)
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_505
Tamlana sedimentorum, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

583713..584435
DNA (723bp) protein (241aa)
tRNA/rRNA methyltransferase ysgA (EC:2.1.1.34); K03437 RNA methyltransferase, TrmH family
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI000378D187
RNA methyltransferase {ECO:0000313|EMBL:KJD35879.1}; TaxID=1435349 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana sedimentorum.;"
scnpilot_p_inoc_scaffold_25_curated_506
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(584493..585068)
DNA (576bp) protein (192aa)
RNP-1 like RNA-binding protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBL9_FLUTR
RNP-1 like RNA-binding protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_507
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

585220..586713
DNA (1494bp) protein (498aa)
Na+/solute symporter n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDI8_FLUTR
Na+/solute symporter
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_508
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

586721..587863
DNA (1143bp) protein (381aa)
Sugar phosphate nucleotidyl transferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDI6_FLUTR
sugar phosphate nucleotidyl transferase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_25_curated_509
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(587871..588689)
DNA (819bp) protein (273aa)
Putative hydrolase of alpha/beta superfamily n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CBA1_9FLAO
Esterase {ECO:0000313|EMBL:KFF75041.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
putative hydrolase of alpha/beta superfamily
scnpilot_p_inoc_scaffold_25_curated_510
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(588706..589038)
DNA (333bp) protein (111aa)
Secreted protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKG3_FLUTR
secreted protein
Secreted protein {ECO:0000313|EMBL:AEA45089.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Displaying items 481-510 of 667 in total

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