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scnpilot_p_inoc_scaffold_25_curated_444

Organism: scnpilot_dereplicated_Flavobacteriia_1

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(512591..513070)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICF3_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 155.0
  • Bit_score: 175
  • Evalue 3.50e-41
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 155.0
  • Bit_score: 175
  • Evalue 1.10e-41
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA45423.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 155.0
  • Bit_score: 175
  • Evalue 4.90e-41

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Taxonomy

Fluviicola taffensis → Fluviicola → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 480
ATGTCTCTGTATAAACCTGTTCATACTCATTTTGAACGGTTTTGCAAAGCGCGCGCTTACGGGGAAATGGATTTTAAAGATTTAATGCAGGAGACAATTGTTGTTGCTTTTGAAAAACTGGACGAACTAAAAAATAAGGAAACATTTCTTCATTTTTTATTCGGTATCAGTGTTCGTATTTTGTCTAATTCAAATAAAAAGCGACGGGAAGCTCAATGGTCTGACTCATTTGAAAAGCGCTCTTCGGATTTTCCGGACACAGATAAAAAGCTGGAAATCGAAGATCTGTACAAAGCTCTGGGGCAATTACCCGAGCAGCAACGGGAGGCATTGATACTTTTTGAGATATCCGGTTTTTCCATAAAGGAAATCGCTGTAATTCAGGAATCCGGTGAGGATGCCGTAAAAAAGCGCTTATCCAGGGGAAGACAGGAACTGGCTCAGATAATAACCCGACAAGATTCACTTGTAACGAATTAA
PROTEIN sequence
Length: 160
MSLYKPVHTHFERFCKARAYGEMDFKDLMQETIVVAFEKLDELKNKETFLHFLFGISVRILSNSNKKRREAQWSDSFEKRSSDFPDTDKKLEIEDLYKALGQLPEQQREALILFEISGFSIKEIAVIQESGEDAVKKRLSRGRQELAQIITRQDSLVTN*