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scnpilot_p_inoc_scaffold_25_curated_539

Organism: scnpilot_dereplicated_Flavobacteriia_1

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(615365..616099)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 242.0
  • Bit_score: 282
  • Evalue 9.90e-74
tRNA pseudouridine synthase A n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBI6_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 242.0
  • Bit_score: 282
  • Evalue 3.10e-73
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 243.0
  • Bit_score: 293
  • Evalue 3.30e-76

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Taxonomy

R_Fluviicola_43_260 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 735
ATGAAACGGTATGCGGTCACACTCGCTTATAACGGTAAAAACTATTTCGGCTGGCAGCGGCAACCGAATCAAATCAGCGTACAGGAAGTTATTGAAAATGCTTTAACCAGATTAAACCGCAATCAGCAGGTGGAAGTGGTCGGCTGCGGCAGGACAGATACGGGAGTTCATGCAGCTCATTATGTGCTTCACGTTGATTTCAATGACATTGAAGATCCGCAGCAGCTTACCTACAAACTGAACAAAATGCTTCCTGATGATATAGTGATCTTCAAAATTGAGGGAGTTTCTCCGGATTTTCATGCGCGTTTTGATGCAAAAAGCAGAACCTACCGCTATTTTTCCCATACTCGAAAAGATTGTTTTAATTATGAACAAAGCCTTTACCTGAATTTACCGGTTGATTTTGAAAAAATGAATGAAGCAGCTCAATATTTTCTGGGCAGGCAGGATTTCACATCGCTTTCAAAATTACATACAGATGTAAAAACAAACATTTGTGAGGTTACACAGGCAAAATGGTTTCAAAAGAGTGAAACAGAATTTTATTTTGAAATTACAGCGGACCGCTTTTTGAGAAATATGGTACGTGCCACCGTGGGAACATTATTAGACGTGGGAACCGGAAAGCTCTCTCCGGATGCTATTCTTTCCATTCTTGAAGCAAAAGACCGCGGCAAAGCAAGCTCTTCCGTTCCCGGACATGCACTTTTTTTATGGGAAATTGTTTATTAG
PROTEIN sequence
Length: 245
MKRYAVTLAYNGKNYFGWQRQPNQISVQEVIENALTRLNRNQQVEVVGCGRTDTGVHAAHYVLHVDFNDIEDPQQLTYKLNKMLPDDIVIFKIEGVSPDFHARFDAKSRTYRYFSHTRKDCFNYEQSLYLNLPVDFEKMNEAAQYFLGRQDFTSLSKLHTDVKTNICEVTQAKWFQKSETEFYFEITADRFLRNMVRATVGTLLDVGTGKLSPDAILSILEAKDRGKASSSVPGHALFLWEIVY*