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scnpilot_p_inoc_scaffold_805_curated

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_805_curated_1
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..828
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00035F99FC
Uncharacterized protein {ECO:0000313|EMBL:KIX19619.1}; Flags: Fragment;; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
YD repeat-/RHS repeat-containing protein
scnpilot_p_inoc_scaffold_805_curated_2
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

812..1405
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X8T2_FLACA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW86533.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87).;"
scnpilot_p_inoc_scaffold_805_curated_3
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1692..2078
DNA (387bp) protein (129aa)
Strain DSM 12611 Contig07, whole genome shotgun sequence {ECO:0000313|EMBL:KIO53376.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
scnpilot_p_inoc_scaffold_805_curated_4
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2430..3830)
DNA (1401bp) protein (467aa)
Outer membrane protein oprM n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVB9_9FLAO
Membrane protein {ECO:0000313|EMBL:KGO81160.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
outer membrane efflux protein precursor
scnpilot_p_inoc_scaffold_805_curated_5
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3841..7005)
DNA (3165bp) protein (1055aa)
multidrug transporter AcrB n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B66CC9
Multidrug transporter AcrB {ECO:0000313|EMBL:KIA99476.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
multidrug efflux transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_p_inoc_scaffold_805_curated_6
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7009..8133)
DNA (1125bp) protein (375aa)
secretion protein HlyD n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B4D756
Secretion protein HlyD {ECO:0000313|EMBL:KIA99477.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
efflux transporter, rnd family, mfp subunit; K03585 membrane fusion protein
scnpilot_p_inoc_scaffold_805_curated_7
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8167..8652)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XUT9_FLAIG
Uncharacterized protein {ECO:0000313|EMBL:KFF15130.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
scnpilot_p_inoc_scaffold_805_curated_8
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8918..9997)
DNA (1080bp) protein (360aa)
Glutamine cyclotransferase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SFR0_9FLAO
Glutamine cyclotransferase {ECO:0000313|EMBL:ESU25411.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
glutamine cyclotransferase
scnpilot_p_inoc_scaffold_805_curated_9
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10316..11119
DNA (804bp) protein (268aa)
Short-chain type dehydrogenase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RY08_9FLAO
Short-chain dehydrogenase {ECO:0000313|EMBL:KGD66799.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
short-chain type dehydrogenase
scnpilot_p_inoc_scaffold_805_curated_10
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11166..11822
DNA (657bp) protein (219aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
tal; Transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2]
Probable transaldolase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XPB2_FLAIG
scnpilot_p_inoc_scaffold_805_curated_11
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11904..13322)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S3G5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO93507.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein
scnpilot_p_inoc_scaffold_805_curated_12
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13478..15097
DNA (1620bp) protein (540aa)
Translation intitiation regulation protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SGB6_9FLAO
Translation intitiation regulation protein {ECO:0000313|EMBL:ESU25297.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
translation intitiation regulation protein
scnpilot_p_inoc_scaffold_805_curated_13
unknown

Not on your lists

15241..16938
DNA (1698bp) protein (566aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_805_curated_14
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17060..19789
DNA (2730bp) protein (910aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034BE14E
Metallophosphoesterase {ECO:0000313|EMBL:KFF17522.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
scnpilot_p_inoc_scaffold_805_curated_15
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19842..21860)
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CAK3_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:KEO71653.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_805_curated_16
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22084..22797)
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z0G6_FLABF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB69357.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
scnpilot_p_inoc_scaffold_805_curated_17
unknown

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comp(22912..23046)
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_805_curated_18
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23136..23558)
DNA (423bp) protein (141aa)
glyoxalase n=1 Tax=Capnocytophaga cynodegmi RepID=UPI0003785418
Glyoxalase family protein {ECO:0000313|EMBL:CEN33656.1}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cynodegmi.;"
Glyoxalase/bleomycin resistance protein/dioxygenase; K07032
scnpilot_p_inoc_scaffold_805_curated_19
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23893..24342)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z6U7_FLABF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB68939.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
scnpilot_p_inoc_scaffold_805_curated_20
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24747..25340)
DNA (594bp) protein (198aa)
Uncharacterized protein {ECO:0000313|EMBL:AJW65109.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
scnpilot_p_inoc_scaffold_805_curated_21
Croceibacter atlanticus, Croceibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25707..26390)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U841_CROAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAP88408.1}; TaxID=216432 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Croceibacter.;" source="Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090).;"
scnpilot_p_inoc_scaffold_805_curated_22
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26726..27007)
DNA (282bp) protein (94aa)
Putative acetyltransferase n=1 Tax=Flavobacterium sp. CF136 RepID=J3BYP0_9FLAO
GNAT family acetyltransferase {ECO:0000313|EMBL:KIX20155.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
N-acetyltransferase GCN5; K06975
scnpilot_p_inoc_scaffold_805_curated_23
Bacteroides sp. CAG:754, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27028..27483)
DNA (456bp) protein (152aa)
Acetyltransferases (EC:2.3.1.128)
Acetyltransferase GNAT family n=1 Tax=Bacteroides sp. CAG:754 RepID=R6DDD8_9BACE
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDA85795.1}; TaxID=1262750 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:754.;"
scnpilot_p_inoc_scaffold_805_curated_24
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27624..28307)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Yersinia mollaretii ATCC 43969 RepID=C4S7U3_YERMO
Hydrolase {ECO:0000313|EMBL:ETR75434.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
putative signal peptide protein
scnpilot_p_inoc_scaffold_805_curated_25
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28545..28937)
DNA (393bp) protein (131aa)
osmotically inducible protein OsmC n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003471F50
Osmotically inducible protein OsmC {ECO:0000313|EMBL:KIA85805.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
OsmC family protein
scnpilot_p_inoc_scaffold_805_curated_26
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28942..29823)
DNA (882bp) protein (294aa)
Pirin-related protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RWQ0_9FLAO
Pirin {ECO:0000313|EMBL:KGO87191.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
pirin; K06911
scnpilot_p_inoc_scaffold_805_curated_27
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29842..30720)
DNA (879bp) protein (293aa)
Pirin domain-containing protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S3H1_9FLAO
Short-chain dehydrogenase {ECO:0000313|EMBL:KGO93512.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
Pirin-like protein; K06911
scnpilot_p_inoc_scaffold_805_curated_28
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30797..31399)
DNA (603bp) protein (201aa)
cAMP-binding protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRC2_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KIA85808.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
cAMP-binding protein
scnpilot_p_inoc_scaffold_805_curated_29
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31604..32158
DNA (555bp) protein (185aa)
phosphoribosyltransferase; K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
Uracil phosphoribosyltransferase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SFE7_9FLAO
PyrR protein {ECO:0000313|EMBL:KGO87195.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
scnpilot_p_inoc_scaffold_805_curated_30
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32180..33106
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
pyrB; aspartate carbamoyltransferase; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
aspartate carbamoyltransferase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B57BB3
Displaying items 1-30 of 39 in total

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