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scnpilot_p_inoc_scaffold_769_curated

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_769_curated_1
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(177..2399)
DNA (2223bp) protein (741aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:KIA82501.1}; EC=1.1.1.42 {ECO:0000313|EMBL:KIA82501.1};; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
isocitrate dehydrogenase (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FT77_9FLAO
scnpilot_p_inoc_scaffold_769_curated_2
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(2652..3002)
DNA (351bp) protein (117aa)
50S ribosomal protein L19 n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S7S1_9FLAO
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
scnpilot_p_inoc_scaffold_769_curated_3
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3172..3849)
DNA (678bp) protein (226aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
trmD; tRNA (Guanine-N(1)-)-methyltransferase (EC:2.1.1.-); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (Guanine-N(1)-)-methyltransferase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SE59_9FLAO
scnpilot_p_inoc_scaffold_769_curated_4
unknown

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comp(3895..4626)
DNA (732bp) protein (244aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_769_curated_5
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4639..5085)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SH31_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU26018.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein
scnpilot_p_inoc_scaffold_769_curated_6
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5090..5890)
DNA (801bp) protein (267aa)
Methyltransferase type 12 n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQ91_9FLAO
Methyltransferase type 12 {ECO:0000313|EMBL:KGO90693.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
Methyltransferase type 11
scnpilot_p_inoc_scaffold_769_curated_7
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6075..7232
DNA (1158bp) protein (386aa)
Major facilitator transporter n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S8E0_9FLAO
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABQ05218.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_769_curated_8
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7308..8240
DNA (933bp) protein (311aa)
ppiC; peptidyl-prolyl cis-trans isomerase PpiC (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase PpiC n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S7L8_9FLAO
Peptidyl-prolyl cis-trans isomerase; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
scnpilot_p_inoc_scaffold_769_curated_9
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8580..8858
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KIX21407.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
scnpilot_p_inoc_scaffold_769_curated_10
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8915..9886
DNA (972bp) protein (324aa)
RimK domain protein ATP-grasp n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5Z5_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:KIX21406.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
RimK domain-containing protein ATP-grasp
scnpilot_p_inoc_scaffold_769_curated_11
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9980..10999
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CEL7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIX21405.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
RimK domain-containing protein ATP-grasp
scnpilot_p_inoc_scaffold_769_curated_12
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11095..11649
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S8D8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO95634.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein
scnpilot_p_inoc_scaffold_769_curated_13
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11697..12083)
DNA (387bp) protein (129aa)
GreA/GreB family elongation factor n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQ87_9FLAO
Gramicidin S synthase {ECO:0000313|EMBL:KDN56135.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase
scnpilot_p_inoc_scaffold_769_curated_14
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12096..13664)
DNA (1569bp) protein (523aa)
glutamate synthase (EC:1.4.1.13)
Glutamate synthase family protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQR1_9FLAO
Glutamate synthase family protein {ECO:0000313|EMBL:ESU28784.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
scnpilot_p_inoc_scaffold_769_curated_15
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13937..14494)
DNA (558bp) protein (186aa)
Alkyl hydroperoxide reductase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6SA98_9FLAO
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:ESU21325.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
alkyl hydroperoxide reductase
scnpilot_p_inoc_scaffold_769_curated_16
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14588..14932
DNA (345bp) protein (115aa)
tRNA-binding protein n=1 Tax=Flavobacterium rivuli RepID=UPI000373EB28
tRNA-binding protein {ECO:0000313|EMBL:KGO93753.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
export-related chaperone CsaA; K06878 tRNA-binding protein
scnpilot_p_inoc_scaffold_769_curated_17
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14980..15924)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FFV7_FLAJ1
Membrane protein {ECO:0000313|EMBL:AKC18016.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_769_curated_18
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15991..16896)
DNA (906bp) protein (302aa)
LysR substrate binding domain protein n=8 Tax=root RepID=C6Z7X8_9BACE
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EFV67847.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
scnpilot_p_inoc_scaffold_769_curated_19
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16942..17736)
DNA (795bp) protein (265aa)
DNA alkylation repair enzyme-like protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FH07_FLAJ1
DNA alkylation repair enzyme-like protein
DNA alkylation repair enzyme-like protein {ECO:0000313|EMBL:ABQ05512.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_769_curated_20
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17733..18371)
DNA (639bp) protein (213aa)
Alkyl hydroperoxide reductase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CK69_ELIME
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:AIM36876.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
alkyl hydroperoxide reductase
scnpilot_p_inoc_scaffold_769_curated_21
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18582..18923
DNA (342bp) protein (114aa)
Transcriptional regulator, HxlR family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZC4_9FLAO
HxlR family transcriptional regulator {ECO:0000313|EMBL:KFF24041.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
HxlR family transcriptional regulator
scnpilot_p_inoc_scaffold_769_curated_22
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18977..19909
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ITW7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KIC00470.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
outer membrane insertion C-terminal signal
scnpilot_p_inoc_scaffold_769_curated_23
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20011..22698)
DNA (2688bp) protein (896aa)
magnesium-translocating P-type ATPase (EC:3.6.3.2)
Magnesium-translocating P-type ATPase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y220_9SPHI
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:EHQ26677.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_p_inoc_scaffold_769_curated_24
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22718..23434)
DNA (717bp) protein (239aa)
Mg2+ transporter-C family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VPX2_9SPHI
Mg2+ transporter-C family protein {ECO:0000313|EMBL:EFK57129.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
MgtC family protein
scnpilot_p_inoc_scaffold_769_curated_25
unknown

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comp(23418..23681)
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_769_curated_26
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23831..26215)
DNA (2385bp) protein (795aa)
Outer membrane receptor protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2JIV0_9FLAO
Outer membrane receptor protein {ECO:0000313|EMBL:EJL60938.1}; Flags: Precursor;; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
TonB-dependent receptor
scnpilot_p_inoc_scaffold_769_curated_27
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26366..27517)
DNA (1152bp) protein (384aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Flavobacterium sp. CF136 RepID=J2S6Q4_9FLAO
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:EJL60937.1}; Flags: Precursor;; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
response regulator receiver protein
scnpilot_p_inoc_scaffold_769_curated_28
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27518..28222)
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z6Y8_FLABF
Strain DSM 12611 Contig03, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54251.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_769_curated_29
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28683..29825
DNA (1143bp) protein (381aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J1N5_9FLAO
Histidine kinase {ECO:0000313|EMBL:KIA94995.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
scnpilot_p_inoc_scaffold_769_curated_30
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29828..32863
DNA (3036bp) protein (1012aa)
putative hybrid two-component system sensor histidine kinase and response regulator receiver (EC:2.7.13.3)
Probable hybrid two-component system sensor histidine kinase and response regulator receiver {ECO:0000313|EMBL:CCB70281.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCB70281.1};; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
Probable hybrid two-component system sensor histidine kinase and response regulator receiver n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z2V2_FLABF
Displaying items 1-30 of 49 in total

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