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scnpilot_p_inoc_scaffold_746_curated

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_746_curated_1
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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446..1624
DNA (1179bp) protein (393aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KGO89940.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KGO89940.1};; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RX53_9FLAO
scnpilot_p_inoc_scaffold_746_curated_2
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1712..2473
DNA (762bp) protein (254aa)
Lipoprotein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SP55_9FLAO
Hydrolase Nlp/P60 {ECO:0000313|EMBL:KGO89939.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
cell wall-associated hydrolase
scnpilot_p_inoc_scaffold_746_curated_3
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2519..3838)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S7J5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO95822.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein
scnpilot_p_inoc_scaffold_746_curated_4
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(3856..6378)
DNA (2523bp) protein (841aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SGV0_9FLAO
scnpilot_p_inoc_scaffold_746_curated_5
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6644..9190
DNA (2547bp) protein (849aa)
ATP-dependent Clp protease, ATP-binding subunit n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RXQ8_9FLAO
ATP-dependent Clp protease, ATP-binding subunit {ECO:0000313|EMBL:ESU19233.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
scnpilot_p_inoc_scaffold_746_curated_6
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9273..10640
DNA (1368bp) protein (456aa)
Putative ribosomal protein S6 modification protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SHD9_9FLAO
30S ribosomal protein S6 modification protein RimK {ECO:0000313|EMBL:KGO89935.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
rimK; 30S ribosomal protein S6; K05844 ribosomal protein S6 modification protein
scnpilot_p_inoc_scaffold_746_curated_7
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10653..11168
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SGH9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU25656.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein
scnpilot_p_inoc_scaffold_746_curated_8
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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11178..11762
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SIW8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU26541.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
scnpilot_p_inoc_scaffold_746_curated_9
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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11819..12184
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SIK8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU26538.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein; K08987 putative membrane protein
scnpilot_p_inoc_scaffold_746_curated_10
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12188..14362)
DNA (2175bp) protein (725aa)
bifunctional trehalose-6-phosphate synthase/HAD hydrolase; K16055 trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J165_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00808.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
scnpilot_p_inoc_scaffold_746_curated_11
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14789..16297)
DNA (1509bp) protein (503aa)
Histidine ammonia-lyase {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026}; EC=4.3.1.3 {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026};; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
histidine ammonia-lyase; K01745 histidine ammonia-lyase [EC:4.3.1.3]
Histidine ammonia-lyase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SGH3_9FLAO
scnpilot_p_inoc_scaffold_746_curated_12
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16443..17804
DNA (1362bp) protein (454aa)
Thiol-disulfide isomerase and thioredoxin {ECO:0000313|EMBL:ESU19241.1}; EC=1.11.1.15 {ECO:0000313|EMBL:ESU19241.1};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
thioredoxin family protein (EC:1.8.1.8)
Thiol-disulfide isomerase and thioredoxin n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RXM6_9FLAO
scnpilot_p_inoc_scaffold_746_curated_13
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18011..18601
DNA (591bp) protein (197aa)
TetR family transcriptional regulator n=1 Tax=Flavobacterium sp. F52 RepID=J1KY74_9FLAO
TetR family transcriptional regulator {ECO:0000313|EMBL:KIA82502.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_746_curated_14
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18612..18833
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y794_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIA82503.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
scnpilot_p_inoc_scaffold_746_curated_15
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18835..20061
DNA (1227bp) protein (409aa)
Major facilitator superfamily MFS_1 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FCT7_FLAJ1
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABQ06975.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_746_curated_16
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20066..20809
DNA (744bp) protein (248aa)
Helix-turn-helix, AraC domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK55_FLUTR
AraC-type helix-turn-helix domain-containing protein
Helix-turn-helix, AraC domain protein {ECO:0000313|EMBL:AEA42954.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_746_curated_17
unidentified eubacterium SCB49, Bacteroidetes, Bacteria

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20839..21996
DNA (1158bp) protein (386aa)
Monooxygenase; possible 2-polyprenyl-6-methoxyphenol hydroxylase n=1 Tax=unidentified eubacterium SCB49 RepID=A6EP37_9BACT
Monooxygenase possible 2-polyprenyl-6-methoxyphenol hydroxylase {ECO:0000313|EMBL:EDM44626.1}; TaxID=50743 species="Bacteria; Bacteroidetes; environmental samples.;" source="unidentified eubacterium SCB49.;"
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase
scnpilot_p_inoc_scaffold_746_curated_18
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22062..22895)
DNA (834bp) protein (278aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SGU1_9FLAO
hypothetical protein
scnpilot_p_inoc_scaffold_746_curated_19
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(23045..23854)
DNA (810bp) protein (270aa)
MORN variant repeat-containing protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TKN0_MARTH
morn variant repeat-containing protein
MORN variant repeat-containing protein {ECO:0000313|EMBL:ADR21196.1}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
scnpilot_p_inoc_scaffold_746_curated_20
unknown

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24038..24151
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_746_curated_21
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24288..26729
DNA (2442bp) protein (814aa)
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I (EC:1.1.1.3 2.7.2.4); K12524 bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
Aspartokinase / Homoserine dehydrogenase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S134_9FLAO
Aspartate kinase {ECO:0000313|EMBL:KGO95810.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
scnpilot_p_inoc_scaffold_746_curated_22
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26741..27664
DNA (924bp) protein (308aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
thrB; Homoserine kinase (EC:2.7.1.39); K00872 homoserine kinase [EC:2.7.1.39]
Homoserine kinase n=1 Tax=Flavobacterium sp. CF136 RepID=J2JHF9_9FLAO
scnpilot_p_inoc_scaffold_746_curated_23
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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27642..28970
DNA (1329bp) protein (443aa)
threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1]
threonine synthase n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002FB27BE
Threonine synthase {ECO:0000313|EMBL:KGD67690.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
scnpilot_p_inoc_scaffold_746_curated_24
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29044..30126
DNA (1083bp) protein (361aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10]
GcvT protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S0Z7_9FLAO
scnpilot_p_inoc_scaffold_746_curated_25
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30235..30948
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S140_9FLAO
Probable transcriptional regulatory protein Q767_08925 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein
scnpilot_p_inoc_scaffold_746_curated_26
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(31016..31435)
DNA (420bp) protein (140aa)
Peroxiredoxin, OsmC subfamily n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ET63_EMTOG
peroxiredoxin, OsmC subfamily
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:AFK02866.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_p_inoc_scaffold_746_curated_27
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31790..32650
DNA (861bp) protein (287aa)
UPF0187 protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KC69_9BACT
Multidrug transporter {ECO:0000313|EMBL:KGD68523.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
UPF0187 protein
scnpilot_p_inoc_scaffold_746_curated_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32821..33426
DNA (606bp) protein (202aa)
Regulatory protein TetR n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C8L1_SPHS2
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:KIC95698.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_p_inoc_scaffold_746_curated_29
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

33454..34719
DNA (1266bp) protein (422aa)
transporter n=1 Tax=Dyadobacter beijingensis RepID=UPI0003627422
Transporter {ECO:0000313|EMBL:KIF30744.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
outer membrane efflux protein
scnpilot_p_inoc_scaffold_746_curated_30
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

34737..35633
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUU4_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KIF30745.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
Displaying items 1-30 of 40 in total

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