ggKbase home page

scnpilot_p_inoc_scaffold_178_curated

Search features with annotation key words

Displaying items 61-90 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_178_curated_61
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

79716..86426
DNA (6711bp) protein (2237aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DID4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP97878.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
putative adhesin
scnpilot_p_inoc_scaffold_178_curated_62
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

86799..87098
DNA (300bp) protein (100aa)
Thioredoxin n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S4C3_9FLAO
Thioredoxin {ECO:0000313|EMBL:ESU21553.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
thioredoxin
scnpilot_p_inoc_scaffold_178_curated_63
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

87120..87326
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RY20_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU19386.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_178_curated_64
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

87452..88753
DNA (1302bp) protein (434aa)
gabD; succinate-semialdehyde dehydrogenase (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde dehydrogenase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S4F6_9FLAO
Aldehyde dehydrogenase {ECO:0000313|EMBL:ESU21546.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
scnpilot_p_inoc_scaffold_178_curated_65
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

88757..89269
DNA (513bp) protein (171aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA84882.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Putative uncharacterized protein id=2837100 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
scnpilot_p_inoc_scaffold_178_curated_66
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

89448..90551
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034DB644
Repressor {ECO:0000313|EMBL:KFF16373.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
repressor-binding protein
scnpilot_p_inoc_scaffold_178_curated_67
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

90685..91119
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S5J2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU21542.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein
scnpilot_p_inoc_scaffold_178_curated_68
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

91137..91703
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R8U1_OWEHD
Globin family protein {ECO:0000313|EMBL:KGE88546.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_178_curated_69
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(91752..92696)
DNA (945bp) protein (315aa)
L-threonine 3-dehydrogenase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SXF0_9FLAO
L-threonine 3-dehydrogenase {ECO:0000313|EMBL:ESU29090.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
NAD-dependent epimerase/dehydratase
scnpilot_p_inoc_scaffold_178_curated_70
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

92876..93463
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SAJ5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU29091.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
scnpilot_p_inoc_scaffold_178_curated_71
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

93507..96863
DNA (3357bp) protein (1119aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair coupling factor n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RYX9_9FLAO
scnpilot_p_inoc_scaffold_178_curated_72
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

96876..97520
DNA (645bp) protein (215aa)
DSBA oxidoreductase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YB42_9SPHI
DSBA oxidoreductase {ECO:0000313|EMBL:EHQ30568.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
dithiol-disulfide isomerase
scnpilot_p_inoc_scaffold_178_curated_73
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(97600..100377)
DNA (2778bp) protein (926aa)
Contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ19928.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
Probable TonB-dependent outer membrane receptorprecursor id=4402353 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
TonB-dependent receptor, plug
scnpilot_p_inoc_scaffold_178_curated_74
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(100577..102187)
DNA (1611bp) protein (537aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J2W5_9FLAO
scnpilot_p_inoc_scaffold_178_curated_75
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(102188..103417)
DNA (1230bp) protein (410aa)
M23/M37 family peptidase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZC5_9FLAO
M23/M37 family peptidase {ECO:0000313|EMBL:ESU19377.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
M23/M37 family peptidase
scnpilot_p_inoc_scaffold_178_curated_76
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(103444..104370)
DNA (927bp) protein (309aa)
Tryptophan 2,3-dioxygenase (EC:1.13.11.11); K00453 tryptophan 2,3-dioxygenase [EC:1.13.11.11]
Tryptophan 2,3-dioxygenase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SAU2_9FLAO
Tryptophan 2,3-dioxygenase {ECO:0000313|EMBL:ESU21535.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
scnpilot_p_inoc_scaffold_178_curated_77
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(104370..105146)
DNA (777bp) protein (259aa)
ATP-dependent exonuclease {ECO:0000313|EMBL:KGO89201.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
Putative uncharacterized protein id=2835693 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
scnpilot_p_inoc_scaffold_178_curated_78
unknown

Not on your lists

105273..105536
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_178_curated_79
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(105443..106603)
DNA (1161bp) protein (387aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27); K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Flavobacterium sp. F52 RepID=J1KTL1_9FLAO
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:EJG01518.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
scnpilot_p_inoc_scaffold_178_curated_80
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(106686..107846)
DNA (1161bp) protein (387aa)
hmgA; homogentisate 1,2-dioxygenase (EC:1.13.11.5); K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5]
Homogentisate 1,2-dioxygenase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XS35_FLAIG
Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:KGO89199.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
scnpilot_p_inoc_scaffold_178_curated_81
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(108096..109733)
DNA (1638bp) protein (546aa)
Probable amino acid-transporting permease n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z422_FLABF
putative amino acid-transporting permease; K03294 basic amino acid/polyamine antiporter, APA family
Probable amino acid-transporting permease {ECO:0000313|EMBL:CCB68360.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
scnpilot_p_inoc_scaffold_178_curated_82
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(109847..112048)
DNA (2202bp) protein (734aa)
Putative patatin-like phospholipase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SAT8_9FLAO
Putative patatin-like phospholipase {ECO:0000313|EMBL:ESU21530.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
patatin; K07001 NTE family protein
scnpilot_p_inoc_scaffold_178_curated_83
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(112050..113855)
DNA (1806bp) protein (602aa)
Excinuclease ABC, C subunit n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S4Q3_9FLAO
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
uvrC; Excinuclease ABC, C subunit; K03703 excinuclease ABC subunit C
scnpilot_p_inoc_scaffold_178_curated_84
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

113982..114956
DNA (975bp) protein (325aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RYX0_9FLAO
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:ESU19369.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein; K06987
scnpilot_p_inoc_scaffold_178_curated_85
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

114949..115521
DNA (573bp) protein (191aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
ygfA; 5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2); K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FMY8_9FLAO
scnpilot_p_inoc_scaffold_178_curated_86
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(115559..116761)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7J4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE63048.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
cell wall/surface repeat protein
scnpilot_p_inoc_scaffold_178_curated_87
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(116835..117428)
DNA (594bp) protein (198aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
LspA protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S5H6_9FLAO
scnpilot_p_inoc_scaffold_178_curated_88
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(117513..117893)
DNA (381bp) protein (127aa)
DnaK suppressor protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SC02_9FLAO
Molecular chaperone DnaK {ECO:0000313|EMBL:KGO89190.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
dksA; DnaK suppressor protein
scnpilot_p_inoc_scaffold_178_curated_89
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(117902..121306)
DNA (3405bp) protein (1135aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase id=2835715 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
Tax=GWF1_Flavobacteria_32_7_curated
scnpilot_p_inoc_scaffold_178_curated_90
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(121399..122112)
DNA (714bp) protein (238aa)
DNA repair protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SCL4_9FLAO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
recO; DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
Displaying items 61-90 of 129 in total

View Taxonomy