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scnpilot_p_inoc_scaffold_178_curated_71

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 93507..96863

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 999.99
  • Bit_score: 2052
  • Evalue 0.0
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 999.99
  • Bit_score: 1893
  • Evalue 0.0
Transcription-repair coupling factor n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RYX9_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 999.99
  • Bit_score: 2052
  • Evalue 0.0

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Taxonomy

Flavobacterium cauense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3357
TTGAAACCCGATATAGTAAACATATACGAAAAGTCTTCAAAAGTGAGTCTTTTGGCAGACCAGCTGCAAAAAAGAGAAAACAAACTGCATCTGAAAGGATTGGTTGGTTCTTCCCTGTCTTTTGTCGTACAATCCCTTTTTTCAAAAAGCGACCTGCCTTTTCTGCTTCTTTTTCAGGATAAAGAAGAAGCGGCTTACTATTTAAATGATCTGGAAAACCTGATAAACGACCAGGACGTTTTGTTCTATCCCGGTTCGTATCGCCGTCCGTACCAGATTGAAGAAACCGACAATGCGAATGTTCTCCTTCGTGCCGAAGTGCTGAACCGCATCAATTCCCGTAAAAAGCCTTCCATAATTGTGTCCTATCCGGATGCGATTTTTGAAAAGGTGGTTACGCGGAAGGAACTGGACAAAAACACGCTGAAAGTGGCTACCGGCGATAATATCTCGATTGATTTTATCAACGAGGTGCTTTTCGAATACAATTTTAAAAGAGTTGATTTTGTGGCCGAACCCGGAGAATTTTCGGTTCGGGGTGGTATTATTGACGTGTTCTCTTTTTCCAACGACAATCCGTATCGTATGGAGTTCTTTGGAAACGAAGTGGACAGTATCCGTACGTTCGACGTAGAAACACAGCTTTCTATTGAAAAGCAGAAAAAGATCACGATCATTCCGAATGTGGAAAACAAATTCCTGAAGGAAAACCGCGAAAGCTTTTTAGACTATATCAATCCGCAAACCGTTATTTTTATCCAGAATACCGATTTGCTGCTGAGCAAACTGGACAAGTTGTTTGACAAGGCCAATGAGGCTTTCGAAAAGCTATCGAAAGAGATCCAGCATGCCACTCCGGAAACCATGTTTTTAAACCAGACTTCTTTCGTTAAGAAGGCTTTGGATTTTACCATAGTGGAGTTTGCTTCAAAACCCATTTTCAGAACGCAGAAAACGGTGGAATTCCACACCCAGCCGCAGCCTTCGTTTAACAAGCAGTTCGATTTGCTTTTAAACAACCTGAACGACAATCATTTTAACGGTTACAAGAATTATCTTTTCTGTTCCAATGAAGGCCAGGCAAAACGTTTCCACGATATTTTCGAGACCCTTGATGAGGCGAATCACGAAAACATCCGGAAGCAGTATAAAACCATCGTGGCTCCGTTATACCAGGGTTTTATAGACGAAGAAAACCAGATTGCCTGTTATACCGATCATCAGATTTTTGAGCGTTACCATAAATTCAATCTTAAAAACGGTTATTCAAAAAAACAGAATATCACGTTAAAAGAGCTTACCACACTATCGGTAGGCGATTATGTAACGCATATTGACCACGGCATCGGGAAATTCGGCGGTTTGCAGAAAATCCAGGTGGAAGGCAAAACACAGGAAGCGATAAAACTGGTTTATGCCGATAACGACATCGTGTATGTGAGTATTCACTCGCTGCATAAAATTTCCAAATACAACGGAAAAGACGGTGCGCCGCCCAAAATATACAAATTAGGTTCTTCTGCATGGAAGACTTTAAAACAGAAAACGAAGGCACGTGTTAAACATATCGCCTTTAACCTGATACAATTATACGCCAAACGCCGACTGGATAAAGGTTTTGCCTTTGCGCCCGACAGTTACCTGCAGGCGGAACTGGAAAGTTCTTTTATTTATGAAGACACGCCGGACCAGTCTAAAGCCACACAGGAAGTGAAAGCCGATATGGAAAACGACAGACCGATGGACCGTCTGGTTTGCGGTGATGTTGGTTTCGGAAAAACGGAAGTCGCGATTCGTGCCGCATTTAAAGCGGTAGACAACGGCAAACAGGTTGCCATCCTGGTACCCACCACAATTCTGGCTTTCCAGCATTACAAAACTTTCCGCGACCGGTTAAAAGACATGCCGGTTAACGTGAGCTATGTGAATCGTTTCCGTACTGCCAAGCAAAAAACGGAGATTCTTAAAAATCTGGAAAGCGGTAAACTCGATATCATCATCGGAACCCACCAACTGGTTAATAAAAATGTTGTTTTTAAAGATCTGGGCTTGCTGATTATTGATGAGGAGCAAAAGTTTGGGGTAGCCGTTAAGGACAAATTAAAAACGATTGCCCAGAATGTCGATACGTTGACGTTAACCGCGACGCCTATCCCGAGAACCTTACAGTTTTCCTTAATGGCGGCAAGGGATTTATCGGTTATTACGACACCTCCGCCCAACCGTTACCCTATAGAAACCAATGTTGTTGGTTTTAATGAAGAAATAATACGCGATGCTGTTTCCTATGAAATTGAACGCGGCGGACAGGTTTATTTTATCAACAACCGTATTGAGAATATCAAGGAGGTTGCCGGAATGATCCAGCGTCTGGTTCCCGGAGCCAAAGTTGGCGTAGGACACGGTCAGATGGACGGTAAAAAACTGGAAGAGCTGATGCTTGCCTTTATGGATGGCGAGTTTGACGTCCTGGTTGCTACAACCATCATTGAAAGCGGACTGGATGTGCCGAATGCGAATACTATTTTCATTAACAATGCCAATAATTTCGGATTGTCGGATTTACACCAGATGCGCGGACGCGTTGGACGAAGCAATAAAAAAGCGTTCTGTTACTTTATCTGCCCGCCTTATTCTGCCATGACGGAGGAAGCCCGGAAGCGTATCCAGGCACTGGAACAGTTCAGCGAACTGGGGAGCGGTTTCAATATTGCGATGAAAGACCTTGAAATCCGAGGTGCCGGCGATTTACTGGGTGGTGAGCAAAGCGGTTTTATCAATGAGATCGGTTTTGATACCTATCAGAAAATTATGAATGAAGCCATCGAGGAATTAAAAGAAAACGAATTTAAGGATCTGTATCCGGAAGAGAATGATATCGAAACCAAAGACTATGTAAAAGATATCCAGATTGATACCGATTTCGAGCTTTTATTCCCGGATGAATATATCAACAATATTTCGGAGCGTCTGAACCTGTATAACGAACTGAGTGTTATTAAAACGGAGGAAGACCTGAAAGTATATGAACAAAAGTTAATTGACCGTTTCGGGCCATTGCCGAAACAGGCTGTTGCCTTACTGAACAGCATCCGCATTAAATGGATCGCTACAAAAATGGGTATTGAGAAGCTCATCTTAAAGCAAGGCAAGATGGTGGGTTATTTTGTTGCCGACCAGCAATCGGATTTCTACCAGTCGGCACGTTTTCACAATGTACTGCGATTTGTACAGCAGCAGGGCAATTTGTGCAAAATGAAAGAAAAGGAAACGAAAAACGGTTTGCGACTGTTATTGACTTTTGAAAATGTAAAATCCATTAAACGCGCCCTGGAGTTAATGGAAATGATGAATTAA
PROTEIN sequence
Length: 1119
LKPDIVNIYEKSSKVSLLADQLQKRENKLHLKGLVGSSLSFVVQSLFSKSDLPFLLLFQDKEEAAYYLNDLENLINDQDVLFYPGSYRRPYQIEETDNANVLLRAEVLNRINSRKKPSIIVSYPDAIFEKVVTRKELDKNTLKVATGDNISIDFINEVLFEYNFKRVDFVAEPGEFSVRGGIIDVFSFSNDNPYRMEFFGNEVDSIRTFDVETQLSIEKQKKITIIPNVENKFLKENRESFLDYINPQTVIFIQNTDLLLSKLDKLFDKANEAFEKLSKEIQHATPETMFLNQTSFVKKALDFTIVEFASKPIFRTQKTVEFHTQPQPSFNKQFDLLLNNLNDNHFNGYKNYLFCSNEGQAKRFHDIFETLDEANHENIRKQYKTIVAPLYQGFIDEENQIACYTDHQIFERYHKFNLKNGYSKKQNITLKELTTLSVGDYVTHIDHGIGKFGGLQKIQVEGKTQEAIKLVYADNDIVYVSIHSLHKISKYNGKDGAPPKIYKLGSSAWKTLKQKTKARVKHIAFNLIQLYAKRRLDKGFAFAPDSYLQAELESSFIYEDTPDQSKATQEVKADMENDRPMDRLVCGDVGFGKTEVAIRAAFKAVDNGKQVAILVPTTILAFQHYKTFRDRLKDMPVNVSYVNRFRTAKQKTEILKNLESGKLDIIIGTHQLVNKNVVFKDLGLLIIDEEQKFGVAVKDKLKTIAQNVDTLTLTATPIPRTLQFSLMAARDLSVITTPPPNRYPIETNVVGFNEEIIRDAVSYEIERGGQVYFINNRIENIKEVAGMIQRLVPGAKVGVGHGQMDGKKLEELMLAFMDGEFDVLVATTIIESGLDVPNANTIFINNANNFGLSDLHQMRGRVGRSNKKAFCYFICPPYSAMTEEARKRIQALEQFSELGSGFNIAMKDLEIRGAGDLLGGEQSGFINEIGFDTYQKIMNEAIEELKENEFKDLYPEENDIETKDYVKDIQIDTDFELLFPDEYINNISERLNLYNELSVIKTEEDLKVYEQKLIDRFGPLPKQAVALLNSIRIKWIATKMGIEKLILKQGKMVGYFVADQQSDFYQSARFHNVLRFVQQQGNLCKMKEKETKNGLRLLLTFENVKSIKRALELMEMMN*