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scnpilot_p_inoc_scaffold_605_curated

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_605_curated_1
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

206..433
DNA (228bp) protein (76aa)
Helix-turn-helix domain protein n=4 Tax=Riemerella anatipestifer RepID=E4TA84_RIEAD
Helix-turn-helix type 3
Helix-turn-helix domain protein {ECO:0000313|EMBL:AFD56247.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
scnpilot_p_inoc_scaffold_605_curated_2
unknown

Not on your lists

748..1398
DNA (651bp) protein (217aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_605_curated_3
Tamlana nanhaiensis, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1471..2352
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00037C5A22
Uncharacterized protein {ECO:0000313|EMBL:KJD31362.1}; TaxID=1382798 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana nanhaiensis.;"
scnpilot_p_inoc_scaffold_605_curated_4
unknown

Not on your lists

2397..2663
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_605_curated_5
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2697..3872)
DNA (1176bp) protein (392aa)
proline dehydrogenase; K00318 proline dehydrogenase [EC:1.5.99.8]
Proline dehydrogenase n=1 Tax=Flavobacterium sp. F52 RepID=J1ABE9_9FLAO
Proline dehydrogenase {ECO:0000313|EMBL:KFF04640.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
scnpilot_p_inoc_scaffold_605_curated_6
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3970..5037
DNA (1068bp) protein (356aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4]
3-dehydroquinate synthase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SKL5_9FLAO
scnpilot_p_inoc_scaffold_605_curated_7
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5340..6746
DNA (1407bp) protein (469aa)
Arginine decarboxylase {ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|SAAS:SAAS00212226};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
Orn/DAP/Arg decarboxylase 2; K01585 arginine decarboxylase [EC:4.1.1.19]
Arginine decarboxylase, biosynthetic n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FV62_9FLAO
scnpilot_p_inoc_scaffold_605_curated_8
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6808..7779
DNA (972bp) protein (324aa)
hypothetical protein; K00809 deoxyhypusine synthase [EC:2.5.1.46]
Deoxyhypusine synthase {ECO:0000313|EMBL:KGO83426.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
Deoxyhypusine synthase id=4975014 bin=GWA2_Flavobacterium_35_26 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
scnpilot_p_inoc_scaffold_605_curated_9
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7879..8316
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SFU8_9FLAO
Primase {ECO:0000313|EMBL:KGO90043.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
scnpilot_p_inoc_scaffold_605_curated_10
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8443..9312
DNA (870bp) protein (290aa)
Tetratricopeptide repeat protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RXF0_9FLAO
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ESU18707.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_605_curated_11
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9389..11416)
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SGT2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU25477.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein
scnpilot_p_inoc_scaffold_605_curated_12
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11476..12222)
DNA (747bp) protein (249aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-ACP reductase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SFX0_9FLAO
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KGO90022.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
scnpilot_p_inoc_scaffold_605_curated_13
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12298..13620)
DNA (1323bp) protein (441aa)
Methionine transporter MetT n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FV09_9FLAO
Methionine transporter MetT {ECO:0000313|EMBL:EIA07571.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
Na+/H+ antiporter NhaC
scnpilot_p_inoc_scaffold_605_curated_14
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13906..14460
DNA (555bp) protein (185aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B4A82E
cAMP-binding protein {ECO:0000313|EMBL:KGL64230.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
cyclic nucleotide-binding protein
scnpilot_p_inoc_scaffold_605_curated_15
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14518..15078
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PL33_MURRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM71062.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
scnpilot_p_inoc_scaffold_605_curated_16
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15131..16003)
DNA (873bp) protein (291aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
succinyl-CoA synthetase subsunit alpha n=1 Tax=Flavobacterium rivuli RepID=UPI000372C267
scnpilot_p_inoc_scaffold_605_curated_17
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16116..16478)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI00031360A5
Uncharacterized protein {ECO:0000313|EMBL:KGO83641.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
scnpilot_p_inoc_scaffold_605_curated_18
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

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comp(16468..17409)
DNA (942bp) protein (314aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase id=2873719 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
Tax=GWF1_Flavobacteria_32_7_curated
scnpilot_p_inoc_scaffold_605_curated_19
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17474..18040)
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SEB5_9FLAO
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
elongation factor P; K02356 elongation factor P
scnpilot_p_inoc_scaffold_605_curated_20
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18080..18865)
DNA (786bp) protein (262aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
UDP-N-acetylglucosamine acyltransferase n=1 Tax=Flavobacterium rivuli RepID=UPI00036389DC
scnpilot_p_inoc_scaffold_605_curated_21
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18877..20265)
DNA (1389bp) protein (463aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
UDP-3-O-acyl-N-acetylglucosamine deacetylase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SLS9_9FLAO
scnpilot_p_inoc_scaffold_605_curated_22
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20295..21311)
DNA (1017bp) protein (339aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S384_9FLAO
scnpilot_p_inoc_scaffold_605_curated_23
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21342..22577)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RWI9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU18851.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
metal dependent phosphohydrolase; K06885
scnpilot_p_inoc_scaffold_605_curated_24
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22857..23987
DNA (1131bp) protein (377aa)
Uncharacterized protein id=2720384 bin=GWF1_Flavobacteria_32_7 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF1_Flavobacteria_32_7_curated
scnpilot_p_inoc_scaffold_605_curated_25
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24344..24982
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12700 RepID=S3XN59_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO87664.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
scnpilot_p_inoc_scaffold_605_curated_26
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25040..26977)
DNA (1938bp) protein (646aa)
OmpA/MotB domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FE71_FLAJ1
Flagellar motor protein MotB {ECO:0000313|EMBL:KGO90548.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
OmpA/MotB domain-containing protein; K03640 peptidoglycan-associated lipoprotein
scnpilot_p_inoc_scaffold_605_curated_27
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26990..27922)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BHJ7_ZUNPS
Membrane protein {ECO:0000313|EMBL:KGO90547.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
scnpilot_p_inoc_scaffold_605_curated_28
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27972..35780)
DNA (7809bp) protein (2603aa)
Conserved repeat domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FE73_FLAJ1
Strain DSM 12611 Contig12, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51914.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_605_curated_29
unknown

Not on your lists

36106..36420
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_605_curated_30
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

36425..37183
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RVS1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU18613.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
Displaying items 1-30 of 47 in total

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