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scnpilot_p_inoc_scaffold_135_curated

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Displaying items 1-30 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_135_curated_1
unknown

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247..846
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000366D562
scnpilot_p_inoc_scaffold_135_curated_2
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1216..1614
DNA (399bp) protein (133aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Flavobacterium sp. F52 RepID=J1KX18_9FLAO
Glyoxalase {ECO:0000313|EMBL:KGO87931.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K07032
scnpilot_p_inoc_scaffold_135_curated_3
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1670..1834
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFJ3_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45707.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_135_curated_4
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2130..3059
DNA (930bp) protein (310aa)
GTP pyrophosphokinase domain protein n=1 Tax=Formosa sp. AK20 RepID=M7MCD9_9FLAO
Dithiol-disulfide isomerase {ECO:0000313|EMBL:KIC63099.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
dithiol-disulfide isomerase
scnpilot_p_inoc_scaffold_135_curated_5
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3244..3696
DNA (453bp) protein (151aa)
Chaperone with DnaK n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S0I2_9FLAO
Chaperone with DnaK {ECO:0000313|EMBL:ESU19777.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
DnaJ-class molecular chaperone
scnpilot_p_inoc_scaffold_135_curated_6

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comp(3756..4121)
DNA (366bp) protein (122aa)
Putative uncharacterized protein id=3341109 bin=GWC2_Bacteroidetes_40_13 species=Dokdonia donghaensis genus=Dokdonia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Uncharacterized protein {ECO:0000313|EMBL:KKN04785.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
protein chain elongation factor ef-tu
scnpilot_p_inoc_scaffold_135_curated_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4391..5035)
DNA (645bp) protein (215aa)
Putative lipoprotein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT54_CHIPD
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ACU60844.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_135_curated_8
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5049..5447)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVR6_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06689.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_135_curated_9
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5676..7688
DNA (2013bp) protein (671aa)
Signal transduction histidine kinase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVR7_SOLCM
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AFD06690.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_135_curated_10
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7681..8316
DNA (636bp) protein (212aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVR8_SOLCM
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:AFD06691.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_135_curated_11
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8368..9084)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI000308BC0A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR30107.1}; TaxID=1118963 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
scnpilot_p_inoc_scaffold_135_curated_12
unknown

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9367..9543
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_135_curated_13
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9848..10330
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FQQ7_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA09187.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_135_curated_14
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10397..11545
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SN19_9FLAO
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:KGO96406.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein
scnpilot_p_inoc_scaffold_135_curated_15
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11583..13493)
DNA (1911bp) protein (637aa)
Putative ATP-binding component of ABC transporter n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SAU3_9FLAO
Glycosyl transferase family 2 {ECO:0000313|EMBL:KGO88894.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
Probably involved in regulation of translation initiation; K06158 ATP-binding cassette, subfamily F, member 3
scnpilot_p_inoc_scaffold_135_curated_16
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13559..13951
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMI6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO88895.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
scnpilot_p_inoc_scaffold_135_curated_17
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13956..15020)
DNA (1065bp) protein (355aa)
FAD dependent oxidoreductase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SG18_9FLAO
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KGO96409.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
FAD dependent oxidoreductase
scnpilot_p_inoc_scaffold_135_curated_18
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

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comp(15088..15999)
DNA (912bp) protein (304aa)
Putative uncharacterized protein id=2606569 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
gldN; Gliding motility protein precursor GldN
Tax=GWF1_Flavobacteria_32_7_curated
scnpilot_p_inoc_scaffold_135_curated_19
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16053..17597)
DNA (1545bp) protein (515aa)
Gliding motility protein GldM {ECO:0000313|EMBL:KGO86010.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
Putative uncharacterized protein id=2606572 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
gldM; gliding motility protein GldM
scnpilot_p_inoc_scaffold_135_curated_20
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17640..18275)
DNA (636bp) protein (212aa)
GldL protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SAT9_9FLAO
Gliding motility protein GldL {ECO:0000313|EMBL:KGO88899.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
gldL; gliding motility transmembrane protein GldL
scnpilot_p_inoc_scaffold_135_curated_21
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18364..19764)
DNA (1401bp) protein (467aa)
GldJ n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9N3_9FLAO
Gliding motility protein Gldk {ECO:0000313|EMBL:KGO88900.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
gldK; gliding motility lipoprotein GldK
scnpilot_p_inoc_scaffold_135_curated_22
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19907..21058)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SNM2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27837.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein
scnpilot_p_inoc_scaffold_135_curated_23
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21061..23580)
DNA (2520bp) protein (840aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2]
DNA topoisomerase I, bacterial n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S043_9FLAO
scnpilot_p_inoc_scaffold_135_curated_24
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24006..25571
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DK24_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP98244.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
vitamin K epoxide reductase
scnpilot_p_inoc_scaffold_135_curated_25
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25747..27942
DNA (2196bp) protein (732aa)
Probable ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XSV4_FLAIG
Probable ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CCG53496.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
ABC-type multidrug transport system, ATPase and permease components; K06147 ATP-binding cassette, subfamily B, bacterial
scnpilot_p_inoc_scaffold_135_curated_26
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27972..29267
DNA (1296bp) protein (432aa)
Putative HlyD-family transporter n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XSV3_FLAIG
putative HlyD-family transporter
Putative HlyD-family transporter {ECO:0000313|EMBL:CCG53495.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
scnpilot_p_inoc_scaffold_135_curated_27
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29419..30864
DNA (1446bp) protein (482aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosedi
2-methylthioadenine synthetase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SSD5_9FLAO
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
scnpilot_p_inoc_scaffold_135_curated_28
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30916..32184
DNA (1269bp) protein (423aa)
Transcriptional regulator, sigma-54-related protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZ65_9FLAO
Transcriptional regulator, sigma-54-related protein {ECO:0000313|EMBL:ESU19761.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
sigma-54-dependent transcriptional regulator
scnpilot_p_inoc_scaffold_135_curated_29
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32199..32705
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9M6_9FLAO
Lipoprotein {ECO:0000313|EMBL:KGO96422.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein
scnpilot_p_inoc_scaffold_135_curated_30
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32724..33605
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S038_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU19759.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
Displaying items 1-30 of 178 in total

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