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scnpilot_p_inoc_scaffold_973_curated

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_973_curated_1
unknown

Not on your lists

comp(1..111)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_973_curated_2
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

560..1330
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI000378834E
Uncharacterized protein {ECO:0000313|EMBL:KFF03071.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
type 11 methyltransferase
scnpilot_p_inoc_scaffold_973_curated_3
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1536..3410)
DNA (1875bp) protein (625aa)
OmpA family protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SA26_9FLAO
Cell envelope biogenesis protein OmpA {ECO:0000313|EMBL:KGD67051.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
putative OmpA family outer membrane protein
scnpilot_p_inoc_scaffold_973_curated_4
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3431..4351)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003626041
Uncharacterized protein {ECO:0000313|EMBL:EAZ96604.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
hypothetical protein
scnpilot_p_inoc_scaffold_973_curated_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4426..7056)
DNA (2631bp) protein (877aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B56FA6
Uncharacterized protein {ECO:0000313|EMBL:GAO45738.1}; Flags: Fragment;; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
mucin 2, oligomeric mucus/gel-forming
scnpilot_p_inoc_scaffold_973_curated_6
unknown

Not on your lists

comp(7206..7439)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_973_curated_7
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7784..8413
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SK85_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27128.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
scnpilot_p_inoc_scaffold_973_curated_8
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8517..8897
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HV21_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59110.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
scnpilot_p_inoc_scaffold_973_curated_9
unknown

Not on your lists

comp(9001..10365)
DNA (1365bp) protein (455aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_973_curated_10
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10557..11150)
DNA (594bp) protein (198aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KP78_HALH1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEE48872.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_973_curated_11
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11166..11804)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00035FEEC2
Contig104, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75350.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
methyltransferase family protein
scnpilot_p_inoc_scaffold_973_curated_12
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11816..12724)
DNA (909bp) protein (303aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L0T1_HALH1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AEE50535.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_973_curated_13
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12833..13057)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S3P7_9FLAO
Contig104, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75351.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
scnpilot_p_inoc_scaffold_973_curated_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13149..14012)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036F3733
AraC family transcriptional regulator {ECO:0000313|EMBL:KIC96242.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_973_curated_15
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14016..14333)
DNA (318bp) protein (106aa)
Putative transcriptional regulator n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K8N9_9FLAO
Putative transcriptional regulator {ECO:0000313|EMBL:EJL69578.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
transcriptional regulator, hxlr family
scnpilot_p_inoc_scaffold_973_curated_16
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14460..14864
DNA (405bp) protein (135aa)
Ketosteroid isomerase-like protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2SVH5_9FLAO
Ketosteroid isomerase-like protein {ECO:0000313|EMBL:EJL69577.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein; K06893
scnpilot_p_inoc_scaffold_973_curated_17
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14993..16432)
DNA (1440bp) protein (480aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1B6_SPHS2
NodT family RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ADZ78050.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_973_curated_18
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16425..19619)
DNA (3195bp) protein (1065aa)
multidrug transporter AcrB n=1 Tax=Flavobacterium rivuli RepID=UPI00035F92A6
Multidrug transporter AcrB {ECO:0000313|EMBL:KGO91921.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_p_inoc_scaffold_973_curated_19
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19643..20728)
DNA (1086bp) protein (362aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1B4_SPHS2
RND family efflux transporter MFP subunit; K03585 membrane fusion protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADZ78048.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_973_curated_20
unknown

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comp(20897..21328)
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_973_curated_21
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21523..23547)
DNA (2025bp) protein (675aa)
Uncharacterized protein n=2 Tax=Elizabethkingia anophelis RepID=L8K1F1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO11506.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
scnpilot_p_inoc_scaffold_973_curated_22
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23704..24162)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000362A58A
Uncharacterized protein {ECO:0000313|EMBL:AKD54863.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_973_curated_23
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24308..25804)
DNA (1497bp) protein (499aa)
Uncharacterized protein n=2 Tax=Myroides RepID=K1HSB5_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ41077.1}; Flags: Precursor;; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
hypothetical protein
scnpilot_p_inoc_scaffold_973_curated_24
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25932..27443)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=2 Tax=Myroides RepID=K1HSB5_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ41077.1}; Flags: Precursor;; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
hypothetical protein
scnpilot_p_inoc_scaffold_973_curated_25
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28788..29945
DNA (1158bp) protein (386aa)
Helix-turn-helix, AraC domain-containing protein n=2 Tax=Myroides RepID=H1Z6E4_MYROD
Uncharacterized protein {ECO:0000313|EMBL:AJW65099.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_973_curated_26
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29956..31083
DNA (1128bp) protein (376aa)
Uncharacterized protein n=2 Tax=Myroides RepID=K1I2Q4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:AJW65098.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
transcriptional regulator, AraC family
scnpilot_p_inoc_scaffold_973_curated_27
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31120..31728)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B5F362
Uncharacterized protein {ECO:0000313|EMBL:KGO86208.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
scnpilot_p_inoc_scaffold_973_curated_28
unknown

Not on your lists

comp(31737..32750)
DNA (1014bp) protein (338aa)

This feature has no annotations

Displaying 28 items

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