ggKbase home page

scnpilot_p_inoc_scaffold_220_curated_6

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 3104..4225

Top 3 Functional Annotations

Value Algorithm Source
GspF-like type II secretion system protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMC8_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 375.0
  • Bit_score: 613
  • Evalue 1.20e-172
type II secretion system protein; K02653 type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 375.0
  • Bit_score: 613
  • Evalue 3.70e-173
GspF-like type II secretion system protein {ECO:0000313|EMBL:ABQ03649.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 375.0
  • Bit_score: 613
  • Evalue 1.70e-172

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium johnsoniae → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1122
ATGAGTTTTGATTTAAGTACCTATAAAAAAGAAAAAACGGAGAAAAAGGATTTCAGGATCGAAACCGGTCAGCTCCAGTTCTCAAAAAAACTATCCGATAAAAAGAAAGAAGTTTTCTATCGGGAATTGGGTATGCTTTTAAAGTCCGGGGTAGATTTTAAAAAAGCACTGGAAATTCTGAGCAATCAGTCCAGTAATAAGCTGGAAAAAGAAATCATTATCGAAATAAAGGATAAAGTAGTAGAAGGCAGGAGTATCTATGAATCCATGAGGGAAACCAAGCAATTTTCGCCCTATGAATATTACAGTATCCAGATTGGGGAAGAAACCCGGAAACTGGAAGAAGTTTTAACCGAACTGCAAAAATACTTCAACCGGAAAATCCAGATGCGCAGGCAGATCGTTTCGGTATTGACCTATCCGGCGATTGTAATGTGTGTGACCATACTGGTATTGTATTTTATGCTGAATAAAGTCGTGCCGATGTTTAGCTCCGTTTTCAAACAATTCGGAAGCGAGCTGCCTAAAAGCACGCAGATCATTCTTAAGATATCGAATCATTCCGGAACCATTTTTACAATAGTGGCGATTGTGATTGCGGGACTGGTTTTAATCCATGTCCTCCTGAAAGGTAAAAATAGCTACAGGGCTTTTACGACCAACATGATTTTAAGAATACCCTATTTTGGAAGCCTGATCCGTAAAATATACATATCCAGGTTCTGTCAGGCCATGAACCTGCTGATAACCTCAAAAACAACGCTCATCAATGCGCTGTCGTTAACCTCCAAAATGATCGGATTCTATCCGATTGAAATTGCAATTGAAGAAATCAAGGAGGATATTACCAGAGGGGTTTCGCTTAGTGACAGTTTAAAGAAACACCATGTTTTTGAAAACAAAATGGTTTCCATGGTTGAAGTGGCCGAACAGGTTAATCAGCTGGATACCATGTTTGAACGACTGGCCGAACAGTATAATGAAGAGATCAGTCACCAGACAAAAATGATTGGAGTAATCCTGGAACCGATGATTATTATTGTAATTGGCGTTATCGTTGGGGTGATCATGGTATCGATGTATGCGCCGATGTTTGATTTAAGTAAAATAATAAATAATTAA
PROTEIN sequence
Length: 374
MSFDLSTYKKEKTEKKDFRIETGQLQFSKKLSDKKKEVFYRELGMLLKSGVDFKKALEILSNQSSNKLEKEIIIEIKDKVVEGRSIYESMRETKQFSPYEYYSIQIGEETRKLEEVLTELQKYFNRKIQMRRQIVSVLTYPAIVMCVTILVLYFMLNKVVPMFSSVFKQFGSELPKSTQIILKISNHSGTIFTIVAIVIAGLVLIHVLLKGKNSYRAFTTNMILRIPYFGSLIRKIYISRFCQAMNLLITSKTTLINALSLTSKMIGFYPIEIAIEEIKEDITRGVSLSDSLKKHHVFENKMVSMVEVAEQVNQLDTMFERLAEQYNEEISHQTKMIGVILEPMIIIVIGVIVGVIMVSMYAPMFDLSKIINN*