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scnpilot_p_inoc_scaffold_220_curated

Search features with annotation key words

Displaying items 1-30 of 174 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_220_curated_1
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3..98)
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMC3_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ03644.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_220_curated_2
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

327..1109
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMC4_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ03645.1}; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_220_curated_3
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1093..2307
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMC5_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KIA97310.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
scnpilot_p_inoc_scaffold_220_curated_4
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2282..2629
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMC6_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ03647.1}; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_220_curated_5
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2592..3107
DNA (516bp) protein (172aa)
GspJ-like type II secretion system protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMC7_FLAJ1
hypothetical protein
GspJ-like type II secretion system protein {ECO:0000313|EMBL:ABQ03648.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_220_curated_6
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3104..4225
DNA (1122bp) protein (374aa)
GspF-like type II secretion system protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMC8_FLAJ1
type II secretion system protein; K02653 type IV pilus assembly protein PilC
GspF-like type II secretion system protein {ECO:0000313|EMBL:ABQ03649.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_220_curated_7
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4298..4732
DNA (435bp) protein (145aa)
GspG-like type II secretion system protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB1_FLAJ1
hypothetical protein
GspG-like type II secretion system protein {ECO:0000313|EMBL:ABQ03650.1}; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_220_curated_8
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4740..5222
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB2_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ03651.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_220_curated_9
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5219..6622
DNA (1404bp) protein (468aa)
GspE-like type II secretion system ATPase n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB3_FLAJ1
type II secretion system protein E; K02652 type IV pilus assembly protein PilB
GspE-like type II secretion system ATPase {ECO:0000313|EMBL:ABQ03652.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_220_curated_10
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6626..8539
DNA (1914bp) protein (638aa)
GspD-like type II secretion system secretin protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB4_FLAJ1
Type II and III secretion system protein {ECO:0000313|EMBL:KIA94985.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
type II and III secretion system protein; K02666 type IV pilus assembly protein PilQ
scnpilot_p_inoc_scaffold_220_curated_11
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8539..9729
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB5_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ03654.1}; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_220_curated_12
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9722..10246
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB6_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KIA97318.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
scnpilot_p_inoc_scaffold_220_curated_13
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10230..11189
DNA (960bp) protein (320aa)
Fibronectin, type III domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB7_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KIA94982.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
fibronectin, type III domain-containing protein
scnpilot_p_inoc_scaffold_220_curated_14
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11194..11706
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB8_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ03657.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_p_inoc_scaffold_220_curated_15
Paenibacillus sp. IHB B 3415, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11926..12999)
DNA (1074bp) protein (358aa)
ankyrin n=1 Tax=Pedobacter agri RepID=UPI00029A2CD5
Ankyrin {ECO:0000313|EMBL:KHL96592.1}; TaxID=867080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHB B 3415.;"
ankyrin
scnpilot_p_inoc_scaffold_220_curated_16
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13818..14051)
DNA (234bp) protein (78aa)
hsdM; type I restriction-modification system, M subunit (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Type I restriction-modification system, M subunit n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11PS3_CYTH3
Strain DSM 12611 Contig14, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51606.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
scnpilot_p_inoc_scaffold_220_curated_17
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14603..15292
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6P2_NIAKG
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
scnpilot_p_inoc_scaffold_220_curated_18
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15404..19267
DNA (3864bp) protein (1288aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000369EA10
ATP-binding protein, putative
Tax=GWF2_Bacteroidetes_43_11_curated
scnpilot_p_inoc_scaffold_220_curated_19
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19448..20506)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037BDCC3
Uncharacterized protein {ECO:0000313|EMBL:KGO85897.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
hypothetical protein
scnpilot_p_inoc_scaffold_220_curated_20
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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20773..22395
DNA (1623bp) protein (541aa)
Resolvase, N-terminal domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0Y5_9FLAO
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFK36161.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
resolvase domain
scnpilot_p_inoc_scaffold_220_curated_21
unknown

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comp(22483..22794)
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_220_curated_22
unknown

Not on your lists

comp(22814..23194)
DNA (381bp) protein (127aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_220_curated_23
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24063..25004
DNA (942bp) protein (314aa)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KGO89252.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KGO89252.1};; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
prsA; Ribose-phosphate diphosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate diphosphokinase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SPK8_9FLAO
scnpilot_p_inoc_scaffold_220_curated_24
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


25035..25646
DNA (612bp) protein (204aa)
RplY protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZJ3_9FLAO
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25
scnpilot_p_inoc_scaffold_220_curated_25
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25815..26381
DNA (567bp) protein (189aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
Pth protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SUP1_9FLAO
scnpilot_p_inoc_scaffold_220_curated_26
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26421..26936
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KGD68980.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
Uncharacterized protein id=2764111 bin=GWF1_Flavobacteria_32_7 species=Aequorivita sublithincola genus=Aequorivita taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
scnpilot_p_inoc_scaffold_220_curated_27
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26990..29692)
DNA (2703bp) protein (901aa)
Putative uncharacterized protein id=2764115 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
proprotein convertase, P
Tax=GWF1_Flavobacteria_32_7_curated
scnpilot_p_inoc_scaffold_220_curated_28
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30121..32988
DNA (2868bp) protein (956aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S802_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU22539.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
fpp2; metalloprotease Fpp2
scnpilot_p_inoc_scaffold_220_curated_29
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33180..35258
DNA (2079bp) protein (693aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S753_9FLAO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
scnpilot_p_inoc_scaffold_220_curated_30
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

35358..36290
DNA (933bp) protein (311aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
Riboflavin biosynthesis protein RibF n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S7A8_9FLAO
Displaying items 1-30 of 174 in total

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