ggKbase home page

scnpilot_p_inoc_scaffold_71_curated_7

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(17270..17962)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LytTR family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FIV7_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 233.0
  • Bit_score: 253
  • Evalue 1.90e-64
LytTR family transcriptional regulator {ECO:0000313|EMBL:KGD67583.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 233.0
  • Bit_score: 261
  • Evalue 9.90e-67
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 233.0
  • Bit_score: 253
  • Evalue 6.00e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium aquatile → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 693
ATGGAAGCTAAATATAAATGCTTAGTTGTTGATGACGAAAAGCCAGCTCACAAGGTCATCAGGTCGCATATTTCGCATTGTAAGGAACTGGAATATTGCGATAGTGCCTATAATGGAAATGAGGCAATGAATTTAATCAGGAAGCAGGAGTACGATATCATCTTTTTGGATATCAACATGCCTTTGGTGAGCGGTATCGAGTTGATGGAAACAATGCCGCAGCGGCCGGTTACGATTGTTACCACTGCCTATTCCGATTTTGCCCTGAAATCGTACCAGCATGATGCTGTGGATTATCTGCTAAAACCGATTTCGCTGTCGCTTTTTATGAAAGCAGTAGCAAAAGCCAAATTGTTTTGTGAAGCCCGGAACAGTAAAAACACCATTAAAAGCACCATACAGCTAAAGGTAAACGGAGAAATGATGGACGTGCTTTTAGACGATATTGTCTGTATTGAAAGTGTGGGCAATTACCTCAAAATATACCTTCAGTCCGGTGTGATTCCGGTGGTTGTTTACGGCAGTCTGATCGAAATCAAAGAAAATCTGGATGAGAATTTTATCCAGGTACACCGTTCACACATTGTAAACAGAAGCCACATGCACGGCAATACCAAACACAACCTGACCTTAACCGATGACAGAATAGTACCCATCGGGAGAAAATACCAGATTTTGATTGACAATGCTTAG
PROTEIN sequence
Length: 231
MEAKYKCLVVDDEKPAHKVIRSHISHCKELEYCDSAYNGNEAMNLIRKQEYDIIFLDINMPLVSGIELMETMPQRPVTIVTTAYSDFALKSYQHDAVDYLLKPISLSLFMKAVAKAKLFCEARNSKNTIKSTIQLKVNGEMMDVLLDDIVCIESVGNYLKIYLQSGVIPVVVYGSLIEIKENLDENFIQVHRSHIVNRSHMHGNTKHNLTLTDDRIVPIGRKYQILIDNA*