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scnpilot_p_inoc_scaffold_71_curated

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Displaying items 1-30 of 257 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_71_curated_1
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2..3187)
DNA (3186bp) protein (1062aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQ40_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIX22432.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
PKD domain-containing protein
scnpilot_p_inoc_scaffold_71_curated_2
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3370..5238)
DNA (1869bp) protein (623aa)
Putative OmpA family outer membrane protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S8E8_9FLAO
Cell envelope biogenesis protein OmpA {ECO:0000313|EMBL:KGO95621.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
putative OmpA family outer membrane protein
scnpilot_p_inoc_scaffold_71_curated_3
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5254..6189)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SWL5_9FLAO
Membrane protein {ECO:0000313|EMBL:KIX22430.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
hypothetical protein
scnpilot_p_inoc_scaffold_71_curated_4
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6260..14122)
DNA (7863bp) protein (2621aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQA1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO84549.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
fibronectin type III domain-containing protein
scnpilot_p_inoc_scaffold_71_curated_5
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14284..15429)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQT0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU28804.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
scnpilot_p_inoc_scaffold_71_curated_6
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15437..17050)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SWM0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU28805.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
DNA-binding domain-containing protein
scnpilot_p_inoc_scaffold_71_curated_7
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17270..17962)
DNA (693bp) protein (231aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FIV7_FLAJ1
LytTR family transcriptional regulator {ECO:0000313|EMBL:KGD67583.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
LytTR family two component transcriptional regulator
scnpilot_p_inoc_scaffold_71_curated_8
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17938..18942)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12700 RepID=S3YDX7_9FLAO
Histidine kinase {ECO:0000313|EMBL:AJH16074.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
signal transduction histidine kinase LytS
scnpilot_p_inoc_scaffold_71_curated_9
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19121..21490
DNA (2370bp) protein (790aa)
Outer membrane protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SHT2_9FLAO
Outer membrane protein {ECO:0000313|EMBL:ESU26014.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
outer membrane protein
scnpilot_p_inoc_scaffold_71_curated_10
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21525..22349
DNA (825bp) protein (275aa)
Lipoprotein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S4Z7_9FLAO
Lipoprotein {ECO:0000313|EMBL:ESU21337.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_71_curated_11
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22407..23093
DNA (687bp) protein (229aa)
thiamine diphosphokinase (EC:2.7.6.2); K00949 thiamine pyrophosphokinase [EC:2.7.6.2]
Thiamine pyrophosphokinase {ECO:0000313|EMBL:KDN56123.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
Thiamin pyrophosphokinase id=4400421 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
scnpilot_p_inoc_scaffold_71_curated_12
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23239..24234
DNA (996bp) protein (332aa)
Putative aminopeptidase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SVA5_9FLAO
Peptidase M28 {ECO:0000313|EMBL:KGO80885.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
M28 family aminopeptidase precursor
scnpilot_p_inoc_scaffold_71_curated_13
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24264..24476)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S5S1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU19710.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
heavy metal transport/detoxification protein
scnpilot_p_inoc_scaffold_71_curated_14
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24507..26711)
DNA (2205bp) protein (735aa)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:ESU19709.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ESU19709.1};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
copper-translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-translocating P-type ATPase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZZ8_9FLAO
scnpilot_p_inoc_scaffold_71_curated_15
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26795..27358)
DNA (564bp) protein (188aa)
AraC family transcriptional regulator n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SEL5_9FLAO
AraC family transcriptional regulator {ECO:0000313|EMBL:KGO93985.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_71_curated_16
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27423..29693)
DNA (2271bp) protein (757aa)
Na+/H+-exchanging protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SG40_9FLAO
Transporter {ECO:0000313|EMBL:KGO96895.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
Na+/H+-exchanging protein
scnpilot_p_inoc_scaffold_71_curated_17
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29818..30540)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11PB1_CYTH3
Histidine kinase {ECO:0000313|EMBL:KGO91654.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
hypothetical protein
scnpilot_p_inoc_scaffold_71_curated_18
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30509..31255)
DNA (747bp) protein (249aa)
Histidine kinase {ECO:0000313|EMBL:KGO88560.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
Signal transduction histidine kinase LytS id=3843037 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
signal transduction histidine kinase LytS
scnpilot_p_inoc_scaffold_71_curated_19
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31262..31651)
DNA (390bp) protein (130aa)
glpE3; thiosulfate sulfurtransferase (EC:2.8.1.1)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000375FA36
Uncharacterized protein {ECO:0000313|EMBL:KGO91652.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
scnpilot_p_inoc_scaffold_71_curated_20
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31782..33143
DNA (1362bp) protein (454aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Coproporphyrinogen III oxidase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RXC1_9FLAO
scnpilot_p_inoc_scaffold_71_curated_21
unknown

Not on your lists

comp(33144..33623)
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_71_curated_22
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33706..33999
DNA (294bp) protein (98aa)
Helix-turn-helix protein n=1 Tax=Alistipes sp. CAG:268 RepID=R6VW18_9BACT
Helix-turn-helix protein {ECO:0000313|EMBL:CDC98639.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_71_curated_23
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34060..34635
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7V8R1_9BACT
IclR family transcriptional regulator {ECO:0000313|EMBL:KGO88977.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
uracil-DNA glycosylase
scnpilot_p_inoc_scaffold_71_curated_24
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34632..35333)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SNN7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU28308.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
scnpilot_p_inoc_scaffold_71_curated_25
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35427..35879)
DNA (453bp) protein (151aa)
Cytochrome cbb3 oxidase maturation protein CcoH n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RYM7_9FLAO
Cytochrome cbb3 oxidase maturation protein CcoH {ECO:0000313|EMBL:ESU19127.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
cytochrome cbb3 oxidase maturation protein CcoH
scnpilot_p_inoc_scaffold_71_curated_26
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35937..37355)
DNA (1419bp) protein (473aa)
4Fe-4S ferredoxin n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SH28_9FLAO
Cytochrome C oxidase {ECO:0000313|EMBL:KGO88974.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
4Fe-4S ferredoxin
scnpilot_p_inoc_scaffold_71_curated_27
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37412..38359)
DNA (948bp) protein (316aa)
CcoP protein {ECO:0000313|EMBL:ESU28311.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ESU28311.1};; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
ccoP; cytochrome c oxidase, cbb3-type subunit III (EC:1.9.3.1); K00406 cytochrome c oxidase cbb3-type subunit III
CcoP protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SNX9_9FLAO
scnpilot_p_inoc_scaffold_71_curated_28
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38371..38559)
DNA (189bp) protein (63aa)
Cytochrome c oxidase, cbb3-type subunit IV n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SHL5_9FLAO
Cytochrome c oxidase, cbb3-type subunit IV {ECO:0000313|EMBL:ESU25747.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
ccoQ; cytochrome c oxidase, cbb3-type subunit IV
scnpilot_p_inoc_scaffold_71_curated_29
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38566..40761)
DNA (2196bp) protein (732aa)
Cytochrome c oxidase subunit CcoN / Cytochrome c oxidase subunit CcoO {ECO:0000313|EMBL:ESU25746.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ESU25746.1};; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; K15862 cytochrome c oxidase cbb3-type subunit I/II [EC:1.9.3.1]
Cytochrome c oxidase subunit CcoN / Cytochrome c oxidase subunit CcoO n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SGQ6_9FLAO
scnpilot_p_inoc_scaffold_71_curated_30
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40764..40955)
DNA (192bp) protein (64aa)
Cytochrome cbb3 oxidase maturation protein CcoS n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMX2_9FLAO
Cytochrome cbb3 oxidase maturation protein CcoS {ECO:0000313|EMBL:ESU25745.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
ccoS; putative cytochrome cbb3 oxidase maturation protein CcoS
Displaying items 1-30 of 257 in total

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