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scnpilot_p_inoc_scaffold_71_curated_164

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 176833..178521

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 562.0
  • Bit_score: 802
  • Evalue 8.50e-230
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00035FBEE9 similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 562.0
  • Bit_score: 827
  • Evalue 1.00e-236
Pseudouridine synthase {ECO:0000313|EMBL:KGO93206.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 558.0
  • Bit_score: 834
  • Evalue 6.90e-239

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Taxonomy

Flavobacterium subsaxonicum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1689
GTGCAGCACACAACTCAAAATAGCATTACTTACTTTTCCGATAGCTCGGTAAACGGGATCACCGTACCGGAACGGTTTACGTTTCCGTTCTATTATGAGCCGCACCCGTTAACCCAAATTGCCGCTGCCGAATTGCAGCACTATCTGGAAACCCAAACGGAGCTGGATCATAATTTCGGACTGACAGCAGACCAGCAGGGACTTGTTATCGGTAAGATGTTTGGCGTTTTGGTGGTTCAGGACAACAACGGGAAACTGGGTTATCTGACTGCCTTTTCAGGAAAACTGGCCGGTACCAACAATCATCCTAAGTTTGTTCCGCCGGTTTTTGACATGCTGATCGAAAACAGCTTTTTCTTAAAAGAAGAGGAAATCCTCAACAGCATCAACCAGCAAATCAAAGCCATCGAGTCGGATGAACATTACAGCATTCTTAAAAGTAATTTTGAGCAGTTTACCGCCCAATCTGTCTTAGAGATAACCGCTTTTAAAAAACAATTAAAAAGCAATAAAGAAAACCGAAAAAAACACCGTGAAGCGCAGCAACCGGTCTTAAGCGAACAGGAATACACTCATTTTGAAGCAGATCTGATCAAACAGAGTTTAAGCGATAAATGGGAACTGACAGTTTTATCGAACAGGTGGAAACAGCTTTTGGAAGCGACCCAATCTGAAATTACCCTATTCGAAAACAGCATTGAAGCCTTAAAGAAAGAACGCAAAGAAAAATCGGCAGCCTTACAACAGCAGCTCTTTGAACAATATGCCTTCCTGAACCAGGACGGAAAGGAAAAAAGCCTGCAGGCGATTTTCAGCGAGACTGTTTTTGGAAAACCACCGGCCGCCGCAGGAGAATGTGCCACACCGAAATTGTTACAATATGCCTTTCTAAACGGCTATAAACCTATTGCCATGGCCGAATTCTGGTGGGGTGCTTCGCCAAAATCGGAAATCCGGAAACACAGGCAGTTTTATCCGGCCTGTACCGGAAAATGCAAACCCATTCTGAGCCACATGCTGGAAGGCATACCTATGGATGAAAATCCGCTTTTAAAAAATTCAGGTGAAGGAACCACACTAACCATTTTTTATGAGGATGACAGCCTTGTCGTGGTTAACAAACCCGCCGAACTGCTCTCTGTTCCGGGAATCCAAATCCAGGATTCCGTTTATACCCGGCTTCAGGCGGCTTTCGGAAACATTGAACCGCTCATCATTCATCGGCTGGACATGTCTACTTCCGGACTTCTGGTGGTGGCCAAAACCAAAGAAGCCCACAAACACATTCAAAGGCAGTTTTTAAAACGAACGGTTATCAAACGGTATACGGCACTGCTTTCCAAAGTGATTTCCGGTGAAGAAGGCGAAATAAAATTACCGCTACGGGGTGATCTGGACAACCGGCCAAGCCAGCTGGTTTGTTTCGAATTCGGAAAAAAAGCGCATACCCGATGGAAGGTTATCCAACGGAATGAAACGACAACCAAAGTCCATTTCTGGCCGCTTACCGGGCGTACCCACCAACTGCGTATGCATGCCGCACACGAACTGGGCCTGAATGCACCCATAGTGGGTGATGATTTATACGGAACGGCTTCCAACAGGCTGCATCTTCATGCGGCTTACCTTGAATTTGTGCATCCCAGAACCAAAGAAACACTCTGCTTTGAAGCAGCCGAAGCTTTTTAA
PROTEIN sequence
Length: 563
VQHTTQNSITYFSDSSVNGITVPERFTFPFYYEPHPLTQIAAAELQHYLETQTELDHNFGLTADQQGLVIGKMFGVLVVQDNNGKLGYLTAFSGKLAGTNNHPKFVPPVFDMLIENSFFLKEEEILNSINQQIKAIESDEHYSILKSNFEQFTAQSVLEITAFKKQLKSNKENRKKHREAQQPVLSEQEYTHFEADLIKQSLSDKWELTVLSNRWKQLLEATQSEITLFENSIEALKKERKEKSAALQQQLFEQYAFLNQDGKEKSLQAIFSETVFGKPPAAAGECATPKLLQYAFLNGYKPIAMAEFWWGASPKSEIRKHRQFYPACTGKCKPILSHMLEGIPMDENPLLKNSGEGTTLTIFYEDDSLVVVNKPAELLSVPGIQIQDSVYTRLQAAFGNIEPLIIHRLDMSTSGLLVVAKTKEAHKHIQRQFLKRTVIKRYTALLSKVISGEEGEIKLPLRGDLDNRPSQLVCFEFGKKAHTRWKVIQRNETTTKVHFWPLTGRTHQLRMHAAHELGLNAPIVGDDLYGTASNRLHLHAAYLEFVHPRTKETLCFEAAEAF*