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scnpilot_p_inoc_scaffold_71_curated_228

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 242218..243564

Top 3 Functional Annotations

Value Algorithm Source
rhlE; putative ATP-dependent RNA helicase RhlE; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 448.0
  • Bit_score: 666
  • Evalue 5.80e-189
Putative ATP-dependent RNA helicase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SP87_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 448.0
  • Bit_score: 797
  • Evalue 5.30e-228
Putative ATP-dependent RNA helicase {ECO:0000313|EMBL:ESU28441.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 448.0
  • Bit_score: 797
  • Evalue 7.50e-228

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Taxonomy

Flavobacterium limnosediminis → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1347
ATGACCACTTTTGAGCAATTCAATCTTCCAAAATCCCTGCAAAAAGCTATAGACGATTTAGGGTTAACAACACCTACTCCTATTCAGGAAAAATCTTTCCCGGTGATTATGTCAGGACGTGATATGATGGGAATTGCCCAAACCGGTACCGGTAAAACGTTTGCCTATTTACTTCCGATCTTAAAACAATGGAAGTTTTCGCCAACGCATACCCCTAAAGTTGTCATCATTGTTCCTACCCGTGAATTAGTGGTTCAGGTAGCCGAAGAAGTCGAAAAACTAACCCGGTACATGTCGGTTCGGGTTTTGGGTGTTTACGGAGGTGTAAATATCAACACCCAGAAAAAAGCCGTTTATGAAGGAATTGATTTCCTGGTAGCCACTCCGGGACGTTTAATGGACCTGGCTTTAGACAATGTGGTTCGTTTTGACGAAATGCAGAAACTGGTTATTGATGAATTTGATGAGATCCTGAATTTAGGATTCCGCTTCCAGATTACATCCATCCTGGCGATGATGAAACCCAAACGTCAGAATATCCTGTTCTCGGCAACCATGACCGAAGAAGTGGATGAACTTTTGGACGATTATTTTGATTTCCCGGAAGAAGTATCGCTGGCACAATCCGGAACACCTCTGGAAAAGATTAAACAATTAGCTTACCATGTGCCGAACTTCCTGACGAAAGTTAACCTTTTAAAGCATTTACTAACTGCCGATGAAAGCCTGGAACGCATCCTGGTTTTTGTGAATAATAAAAGAGTAGCCGATATTTTAATGGAACATCTGGAAGAAGATTTCCCGGAACAATTTGGCGTTATTCACTCCAATAAATCCCAGAACTATCGTTTGAACACGATGGCAAAATTCCAGGAAGGCGAATTACGCGGTATTGTCACTACCGATATTATGGCGCGTGGATTGGATATTTCCGATATTACCCACGTGATCAACATGCAGTTTTCGGAAGTTCCCGAACAATATATCCACAGAATCGGTCGTACCGGACGTGCAGACAAAGATGGTATTGCCATTAGCATCATCGCGCCGAAAGAAGAAGAATTCCAGGTGGAAGCCGAATTATTAATGGAGCAGGAACTGGAAATGTTACCAATTCCGGAAGGCGTAAAAATTGAAGAGAAAAAACTGGAATTTGAAAAAGAGCAGCAAAAAGTTAAATTCCTGATGAAAAAGGTGAAGCTTGACGGTGGCGGTGCTTTTCATGAAAAAACAGATAAAAACAAAAAAGTAAATCTTGGTGGTCCCGGAAAACGTACTCCGCGAAAAACCAAACCAAGAAACCGCGGGGTGGAAAAAACCAGAGCGGCCAAAAAGAAAAAGAAATAA
PROTEIN sequence
Length: 449
MTTFEQFNLPKSLQKAIDDLGLTTPTPIQEKSFPVIMSGRDMMGIAQTGTGKTFAYLLPILKQWKFSPTHTPKVVIIVPTRELVVQVAEEVEKLTRYMSVRVLGVYGGVNINTQKKAVYEGIDFLVATPGRLMDLALDNVVRFDEMQKLVIDEFDEILNLGFRFQITSILAMMKPKRQNILFSATMTEEVDELLDDYFDFPEEVSLAQSGTPLEKIKQLAYHVPNFLTKVNLLKHLLTADESLERILVFVNNKRVADILMEHLEEDFPEQFGVIHSNKSQNYRLNTMAKFQEGELRGIVTTDIMARGLDISDITHVINMQFSEVPEQYIHRIGRTGRADKDGIAISIIAPKEEEFQVEAELLMEQELEMLPIPEGVKIEEKKLEFEKEQQKVKFLMKKVKLDGGGAFHEKTDKNKKVNLGGPGKRTPRKTKPRNRGVEKTRAAKKKKK*