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scnpilot_p_inoc_scaffold_71_curated_242

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(255585..256169)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor/ECF subfamily (Sigma-70) n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SFR2_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 194.0
  • Bit_score: 358
  • Evalue 3.60e-96
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGO97000.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 194.0
  • Bit_score: 358
  • Evalue 5.00e-96
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 194.0
  • Bit_score: 316
  • Evalue 4.90e-84

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Taxonomy

Flavobacterium enshiense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGGCTAATGTTGTACTTCCAGACGCTGTCTTGGTGAAAAATTATGTAGGTGGAGATGAAACTGCTTTGGCTACACTAATTGAAAGACATCAATCAAAAATTTATGGTTTTATTTATTCTAAAGTAATGGATCGTGAAATTACGGAGGATATATTTCAGGATACCTTTATTAAGGTAATAAAAACATTAAAAACAAAAAACTATAACGAAGAAGGTAAGTTTTTACCCTGGGTGATGCGTATTTCACATAATTTGATTGTCGATTATTTCAGAAAATCGAAAAAAATGCCTTATCACAGAGAAACGGAAGAGTTTTCTATTTTTTCTATCATGACCGACAACAGTCCGAATGTGGAAAACCGGATTATCAGTGAGCAGGTAGAAGTGGATTTACAGCGTTTAATCGAGGAACTTCCTGAGGATCAGAAAGAAGTACTGGTAATGCGTATGTATCAGGACCTTAGCTTTAAAGAAATCGCCGATTTAACCGGAGTGAGTATCAATACAGCTTTGGGAAGAATGCGTTATGCGTTGATGAACCTGAGAAAAGTGATCGAGAAAAATCAAATTATTTTAACGAACTAA
PROTEIN sequence
Length: 195
MANVVLPDAVLVKNYVGGDETALATLIERHQSKIYGFIYSKVMDREITEDIFQDTFIKVIKTLKTKNYNEEGKFLPWVMRISHNLIVDYFRKSKKMPYHRETEEFSIFSIMTDNSPNVENRIISEQVEVDLQRLIEELPEDQKEVLVMRMYQDLSFKEIADLTGVSINTALGRMRYALMNLRKVIEKNQIILTN*