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scnpilot_p_inoc_scaffold_667_curated_10

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 10857..11372

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S013_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 171.0
  • Bit_score: 315
  • Evalue 3.10e-83
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ESU19729.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 171.0
  • Bit_score: 315
  • Evalue 4.30e-83
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 169.0
  • Bit_score: 244
  • Evalue 2.10e-62

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Taxonomy

Flavobacterium cauense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 516
ATGAACCAACAGGAGTTTATAAAATTGATTTCTCCTTTTAAAGACAAATTGTTTCGGATGGCGAAACGTTTGCTTGTGAGTACTGAAGAAGCCGAAGATGCTACTCAGGAAGTTTTGGTGAAATTATGGAAAAATAACAATGTACTGTCGAGCTATTCCAGTGTTGAAGCTTTTGCAATGACGATGACCAAAAACTACTGTCTTGACCAGTTAAAGTCAAAAAGGGCCTCAAATTTGCAAATCGTACATAGCAATTACTCGGACGGAACGGCAAATGTTCAAAAACAACTTGAAGATAAAGACAGCTGGGACTGGGTGGAAAAAATAATGGAAACATTACCCGAGCAGCAGCGGCTTATTCTTCAAATGAGAGAAGTAGAGGAATATGAATTCTCGGAAATCGCCAAAATCATGGATATGAATGAAACAGCAGTGCGGGTGGCATTATCGAGAGCAAGGAAAATAATAAGAGAACAATTGGTTAAAAAACACAATTATGGAATTCAATTCAATTAA
PROTEIN sequence
Length: 172
MNQQEFIKLISPFKDKLFRMAKRLLVSTEEAEDATQEVLVKLWKNNNVLSSYSSVEAFAMTMTKNYCLDQLKSKRASNLQIVHSNYSDGTANVQKQLEDKDSWDWVEKIMETLPEQQRLILQMREVEEYEFSEIAKIMDMNETAVRVALSRARKIIREQLVKKHNYGIQFN*