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scnpilot_p_inoc_scaffold_492_curated_7

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 7448..8086

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C9Y3_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 196.0
  • Bit_score: 232
  • Evalue 5.50e-58
Helix-turn-helix protein {ECO:0000313|EMBL:EIJ40426.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 196.0
  • Bit_score: 232
  • Evalue 7.70e-58
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 195.0
  • Bit_score: 173
  • Evalue 7.30e-41

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Taxonomy

Joostella marina → Joostella → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 639
TTGTTTTTAACATACAAATGGCCTTTACATCTATTTAAAGTCTACAATTTTTTATACCCTAAAATGTCCATATTAAAAAATATAAGGGAGCAACAAAATCTTACTCAGGAAGAATTAGCGGATCGATCCGGTATTTCGACAAGAACAATACAAAGAATTGAAGCGGGAACAAAACCGAAAGGATATACCCTAAAAATATTAGCAAAGACATTAGGTGTTAAAGAAGAAGAGTTACTGCACAAAAAAGTACAGGAAGCAATTGCAGGAAATCCGGAAGAGAAGGCAATCCGTATGGAAGAACCGGTTTTAGTAAATTATTCATTAATAAAATTAATCAACCTTTCGTCGATACTCTTTGTCATTCTTCCACCCCTTAATATTCTTCTTCCGGTTGTATTGATGTTTGCAACGAAGCAGAAAAATCAGGTAATCAAACAAATTATTTCGATTCAGATTATCTGGACAATTGCAGCGCCCATTATATTTATGATGGTAATTTTTACAAAGCCTGGAAATAAGGTTACATTGTTTACGATGGTAGCTCTGGTTTTAGTGAATATTTACATAATCCTTAGAAATGCAATGGAGATCGATAGAAATAAAAAGCTGTATTATAGGTTGAATTTCAGTATGATATAA
PROTEIN sequence
Length: 213
LFLTYKWPLHLFKVYNFLYPKMSILKNIREQQNLTQEELADRSGISTRTIQRIEAGTKPKGYTLKILAKTLGVKEEELLHKKVQEAIAGNPEEKAIRMEEPVLVNYSLIKLINLSSILFVILPPLNILLPVVLMFATKQKNQVIKQIISIQIIWTIAAPIIFMMVIFTKPGNKVTLFTMVALVLVNIYIILRNAMEIDRNKKLYYRLNFSMI*