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scnpilot_p_inoc_scaffold_492_curated

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Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_492_curated_1
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(127..1266)
DNA (1140bp) protein (380aa)
acyl-CoA dehydrogenase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B44674
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KIX21800.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
acyl-CoA dehydrogenase
scnpilot_p_inoc_scaffold_492_curated_2
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1396..2433
DNA (1038bp) protein (346aa)
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
AnmK protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S2N8_9FLAO
AnmK protein {ECO:0000313|EMBL:ESU20938.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
scnpilot_p_inoc_scaffold_492_curated_3
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2509..3735
DNA (1227bp) protein (409aa)
Glu/Leu/Phe/Val dehydrogenase (EC:1.4.1.-)
Amino acid dehydrogenase {ECO:0000313|EMBL:AIG32947.1}; NADP-specific glutamate dehydrogenase {ECO:0000313|EMBL:AIJ37369.1}; EC=1.4.1.4 {ECO:0000313|EMBL:AIJ37369.1};; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
Glu/Leu/Phe/Val dehydrogenase family protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6H0W7_FLAPJ
scnpilot_p_inoc_scaffold_492_curated_4
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3858..4751
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S3D2_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESU20934.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
scnpilot_p_inoc_scaffold_492_curated_5
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4784..5998
DNA (1215bp) protein (405aa)
folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12 6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
FolC protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S461_9FLAO
Tetrahydrofolate synthase {ECO:0000313|EMBL:KGO97036.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
scnpilot_p_inoc_scaffold_492_curated_6
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6536..7075
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BL96_ZUNPS
Uncharacterized protein {ECO:0000313|EMBL:KFF06595.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
hypothetical protein
scnpilot_p_inoc_scaffold_492_curated_7
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7448..8086
DNA (639bp) protein (213aa)
Helix-turn-helix protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C9Y3_9FLAO
Helix-turn-helix protein {ECO:0000313|EMBL:EIJ40426.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
helix-turn-helix domain-containing protein
scnpilot_p_inoc_scaffold_492_curated_8
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

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8174..9670
DNA (1497bp) protein (499aa)
beta-lactamase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034AED5D
beta-lactamase
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
scnpilot_p_inoc_scaffold_492_curated_9
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9868..11019
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CLH3_ELIME
Uncharacterized protein {ECO:0000313|EMBL:AJW63460.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
hypothetical protein
scnpilot_p_inoc_scaffold_492_curated_10
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11160..11753)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B503A8
Uncharacterized protein {ECO:0000313|EMBL:KGO89275.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
scnpilot_p_inoc_scaffold_492_curated_11
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11740..12246)
DNA (507bp) protein (169aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S3C7_9FLAO
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_p_inoc_scaffold_492_curated_12
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12253..13104)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S2N1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU20928.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_492_curated_13
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13209..14492)
DNA (1284bp) protein (428aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10); K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
MurF protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S3U9_9FLAO
scnpilot_p_inoc_scaffold_492_curated_14
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14569..16293)
DNA (1725bp) protein (575aa)
Gliding motility lipoprotein GldJ n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S2K2_9FLAO
Gliding motility protein GldJ {ECO:0000313|EMBL:KGO89278.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
gldJ; Gliding motility lipoprotein precursor GldJ
scnpilot_p_inoc_scaffold_492_curated_15
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16453..20325
DNA (3873bp) protein (1291aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S930_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU20925.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
porU; hypothetical protein
scnpilot_p_inoc_scaffold_492_curated_16
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20366..21538
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J246_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIX21786.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
fjo23; hypothetical protein
scnpilot_p_inoc_scaffold_492_curated_17
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21614..22096
DNA (483bp) protein (161aa)
Cytidine deaminase {ECO:0000313|EMBL:ESU23643.1}; EC=3.5.4.5 {ECO:0000313|EMBL:ESU23643.1};; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
cytidine deaminase; K01489 cytidine deaminase [EC:3.5.4.5]
Cytidine deaminase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SAF7_9FLAO
scnpilot_p_inoc_scaffold_492_curated_18
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22347..23345
DNA (999bp) protein (333aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
pdhA; Pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component alpha subunit n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SBN3_9FLAO
scnpilot_p_inoc_scaffold_492_curated_19
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23352..24989
DNA (1638bp) protein (546aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
pdhC; Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Dihydrolipoyllysine-residue acetyltransferase (Dihydrolipoamide S-acetyltransferase) n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SL11_9FLAO
scnpilot_p_inoc_scaffold_492_curated_20
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25080..26048
DNA (969bp) protein (323aa)
Peptidase M28 {ECO:0000313|EMBL:KIX21447.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
Putative aminopeptidase id=2533318 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
peptidase M28
scnpilot_p_inoc_scaffold_492_curated_21
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26094..26771
DNA (678bp) protein (226aa)
Probable short-chain type dehydrogenase n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GZE3_FLAPJ
short-chain type dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:AKC17478.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
scnpilot_p_inoc_scaffold_492_curated_22
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26807..27406
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SLA0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27386.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
scnpilot_p_inoc_scaffold_492_curated_23
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27453..28514
DNA (1062bp) protein (354aa)
manC; mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SAD9_9FLAO
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KGO89286.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
scnpilot_p_inoc_scaffold_492_curated_24
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28537..29301)
DNA (765bp) protein (255aa)
ABC-type transport system, ATPase component n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SAG8_9FLAO
ABC-type transport system, ATPase component {ECO:0000313|EMBL:ESU23636.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
ABC transporter-like protein
scnpilot_p_inoc_scaffold_492_curated_25
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29304..30008)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SGU5_9FLAO
ABC transporter permease {ECO:0000313|EMBL:KGO89289.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
ABC transporter permease; K02066 putative ABC transport system permease protein
scnpilot_p_inoc_scaffold_492_curated_26
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30120..30968)
DNA (849bp) protein (283aa)
Glycosyl transferase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SB03_9FLAO
Glycosyl transferase {ECO:0000313|EMBL:ESU23634.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
glycosyl transferase
scnpilot_p_inoc_scaffold_492_curated_27
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30968..31492)
DNA (525bp) protein (175aa)
Uncharacterized protein id=4226513 bin=GWA2_Flavobacterium_35_26 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
Uncharacterized protein {ECO:0000313|EMBL:EJL66639.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
hypothetical protein
scnpilot_p_inoc_scaffold_492_curated_28
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31495..32553)
DNA (1059bp) protein (353aa)
fabH1; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-oxoacyl-[acyl-carrier-protein] synthase III protein FabH1 n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XSC9_FLAIG
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:KGO84187.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
scnpilot_p_inoc_scaffold_492_curated_29
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32673..33053)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GZD3_FLAPJ
Uncharacterized protein {ECO:0000313|EMBL:KGO84188.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein; K06886 hemoglobin
scnpilot_p_inoc_scaffold_492_curated_30
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33201..36050)
DNA (2850bp) protein (950aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2]
Glycine dehydrogenase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S4P3_9FLAO
Displaying items 1-30 of 141 in total

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