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scnpilot_p_inoc_scaffold_492_curated_11

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(11740..12246)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S3C7_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 168.0
  • Bit_score: 257
  • Evalue 9.70e-66
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 168.0
  • Bit_score: 257
  • Evalue 1.40e-65
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 162.0
  • Bit_score: 188
  • Evalue 1.70e-45

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Taxonomy

Flavobacterium cauense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 507
GTGACATTAGAGCAGCAAAGAGATACCGTTTTCAGGGATTTATACGCCCAATACGCGGCTAAAATACACCGGATATGCCTCGGATACACCGGAAACGCGATGGAAGCCGACGATCTGCTTCAGGAAGTTTTTATCAAAGTATGGCAAAACTATGACAAGTTCAGGGGAGAATCCAAAATAGCCACCTGGATATACCGTATTGCCGTGAACACCTGCCTGTATCATATCCGTTCTCAAAAAAATAAAAAGACAACGGCTATTGAAAACAGCAACATTCATTTAAAAACAGAAGAGCCCGACAGCAAAGAACAACAGATCCAGCTGCTATACAAATGCATCAGCGAACTGGCAGAATCCGACAGGCTGATCATTACGATGCTGCTGGAAGACGTTCCCTACTCAGAAATAGCCGCAGCGACCGAAATTTCAGAAGGCAACCTGAGAGTAAAAATCCACCGTATTAAACAACAGTTAAGCACAATCTATAAGAAATATGAAAGAGTTTGA
PROTEIN sequence
Length: 169
VTLEQQRDTVFRDLYAQYAAKIHRICLGYTGNAMEADDLLQEVFIKVWQNYDKFRGESKIATWIYRIAVNTCLYHIRSQKNKKTTAIENSNIHLKTEEPDSKEQQIQLLYKCISELAESDRLIITMLLEDVPYSEIAAATEISEGNLRVKIHRIKQQLSTIYKKYERV*