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scnpilot_p_inoc_scaffold_135_curated_171

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(196802..197701)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridylate synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 299.0
  • Bit_score: 429
  • Evalue 1.00e-117
Pseudouridylate synthase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SZ59_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 298.0
  • Bit_score: 502
  • Evalue 3.10e-139
Pseudouridylate synthase {ECO:0000313|EMBL:ESU29680.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 298.0
  • Bit_score: 502
  • Evalue 4.30e-139

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Taxonomy

Flavobacterium limnosediminis → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 900
ATGAATAACGGAAAAGGAAATAATAAAAGAGGTACTTCATCGGGAAAACCAAGTTTCGGGCCTAAAAAGGCTAAGCCATCGGGAGGTTCTTCTTTTAAGAAAGATGATAAGAAAGGTGGTTTTTCAAAACCAAAACCTTCTTTTGACAGAAAACCAAAGGCACCTAAAGCTCCAAAAACACCAGGTAATCCGGACGAAATACGTTTAAATAAATACATCTCTAATTCCGGAGTTTGCTCCCGTCGTGATGCGGATATTTATATCCAGTCCGGAAACGTAAAAGTTAACGGTGAAGTGATCACAGAAATGGGATACAAAGTGAAACTGAATGATGTGGTGAATTTTGACGGAACGGTAATCACTCCTGAGAAAAAAGAATACATCCTGTTGAATAAGCCAAAAGGATTTACAACAGCCGGCGACGGTGATGTAAACACCAGCAATGTACTGGATTTGGTGCGTAATGCTACAAGAGCAAGATTGCAGGCAGTAGGGCGTATGGATAAAACAACCACCGGTTTGTTATTGTTTACCAATGATACCGACATGGTTCGTAAATTCACGATCCCGAACCAGCGTTCTTCAAAAGTATACCAGATATCGTTAGATAAAAACCTGAAATACGAAGACCTGGAAAAAGTGGCAGGCGGACTGACAATAGAAAATCACCGTGTTTTTGTAGAAGAGATCTCCTATATTGAAGAACAGCCAAAGAGTGAAATCGGGTTAAAAATGAAAACATCCAACGTAAAAGTAGTGCGTTCTATCTTCGAACATTTGGGATATGATGTTTTAAAAGTGGACCGTGTTGTTTTTGCAGGATTAACGAAAAAGAACCTGCCAAGAGGAAACTGGCGTTTCTTAACAGAACAAGAAATTATCAATTTAAAGAATATATAA
PROTEIN sequence
Length: 300
MNNGKGNNKRGTSSGKPSFGPKKAKPSGGSSFKKDDKKGGFSKPKPSFDRKPKAPKAPKTPGNPDEIRLNKYISNSGVCSRRDADIYIQSGNVKVNGEVITEMGYKVKLNDVVNFDGTVITPEKKEYILLNKPKGFTTAGDGDVNTSNVLDLVRNATRARLQAVGRMDKTTTGLLLFTNDTDMVRKFTIPNQRSSKVYQISLDKNLKYEDLEKVAGGLTIENHRVFVEEISYIEEQPKSEIGLKMKTSNVKVVRSIFEHLGYDVLKVDRVVFAGLTKKNLPRGNWRFLTEQEIINLKNI*