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scnpilot_p_inoc_scaffold_1291_curated_15

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(11983..12330)

Top 3 Functional Annotations

Value Algorithm Source
RRM domain-containing RNA-binding protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C0D9_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 119.0
  • Bit_score: 172
  • Evalue 2.80e-40
RNA-binding protein {ECO:0000313|EMBL:KIX19687.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 116.0
  • Bit_score: 176
  • Evalue 2.70e-41
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 114.0
  • Bit_score: 168
  • Evalue 1.30e-39

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Taxonomy

Flavobacterium sp. 316 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 348
ATGAACATTTTTGTTGGAAGTCTTCCATTTAACGTAGAGGAAGCAGATTTAAGAGGATATTTTGAAGAGTATGGTACTGTTGACTCGGTTAAACTTATTACAGATAAATTCACAGGTAGAAGTAAAGGATTCGGTTTTATCGAAATGCCAAATGATGACGAAGCTCAAAAAGCTATCGATGAATTGAACGGAGGACAAATCGACGGTCGTACAATTGTAGTGAATAAATCAGAACCAAGACCACAAACACAAAGAAGCAATGGCTTTGGCGGTAACAACCGTGGTGGTAATGGTGGTTATAACTCAAACAGAGGTAACAATAACGGAGGCGGCAGAGGTCGTTACTAA
PROTEIN sequence
Length: 116
MNIFVGSLPFNVEEADLRGYFEEYGTVDSVKLITDKFTGRSKGFGFIEMPNDDEAQKAIDELNGGQIDGRTIVVNKSEPRPQTQRSNGFGGNNRGGNGGYNSNRGNNNGGGRGRY*