ggKbase home page

scnpilot_p_inoc_scaffold_1291_curated

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1291_curated_1
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..416
DNA (414bp) protein (138aa)
Integrase catalytic region n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6X663_CELAD
Integrase {ECO:0000313|EMBL:KGO83519.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
integrase
scnpilot_p_inoc_scaffold_1291_curated_2
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(459..1364)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B56D5C
Putative uncharacterized protein {ECO:0000313|EMBL:EIA08014.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1291_curated_3
unknown

Not on your lists

1700..1933
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1291_curated_4
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1979..3943
DNA (1965bp) protein (655aa)
Putative signal transduction histidine kinase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FU92_9FLAO
Putative signal transduction histidine kinase {ECO:0000313|EMBL:EIA08016.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
signal transduction histidine kinase
scnpilot_p_inoc_scaffold_1291_curated_5
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3955..4611
DNA (657bp) protein (219aa)
transcriptional regulator n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002DC6D3B
Putative uncharacterized protein {ECO:0000313|EMBL:EIA10501.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
response regulator receiver protein
scnpilot_p_inoc_scaffold_1291_curated_6
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4755..5807
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XPU3_FLAIG
Restriction endonuclease or methylase {ECO:0000313|EMBL:KIA87724.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein; K07504 hypothetical protein
scnpilot_p_inoc_scaffold_1291_curated_7
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5794..6303
DNA (510bp) protein (170aa)
SH3 type 3 domain-containing protein n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8XA10_FLACA
SH3 type 3 domain-containing protein
SH3 type 3 domain-containing protein {ECO:0000313|EMBL:AEW85174.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87).;"
scnpilot_p_inoc_scaffold_1291_curated_8
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6327..6737
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2S5R5_9FLAO
Contig_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22398.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1291_curated_9
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6741..8009
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3BY97_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA92718.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1291_curated_10
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8014..8910
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KNI2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJF99692.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1291_curated_11
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8977..9780
DNA (804bp) protein (268aa)
Deoxyribonuclease gamma n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SDW9_9FLAO
Endonuclease {ECO:0000313|EMBL:KIA87723.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Endonuclease/exonuclease/phosphatase precursor
scnpilot_p_inoc_scaffold_1291_curated_12
unknown

Not on your lists

9863..10351
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1291_curated_13
unknown

Not on your lists

10447..10920
DNA (474bp) protein (158aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1291_curated_14
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

11238..11915
DNA (678bp) protein (226aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EC13_9SPHI
PAS sensor protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_p_inoc_scaffold_1291_curated_15
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11983..12330)
DNA (348bp) protein (116aa)
RRM domain-containing RNA-binding protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C0D9_9FLAO
RNA-binding protein {ECO:0000313|EMBL:KIX19687.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
RNP-1 like RNA-binding protein
scnpilot_p_inoc_scaffold_1291_curated_16
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12819..13463
DNA (645bp) protein (215aa)
LuxR family transcriptional regulator n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B644A8
Uncharacterized protein {ECO:0000313|EMBL:KGO79287.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
two component LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_1291_curated_17
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13469..16477)
DNA (3009bp) protein (1003aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B48FF0
Uncharacterized protein {ECO:0000313|EMBL:KGO79288.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
histidine kinase
scnpilot_p_inoc_scaffold_1291_curated_18
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16689..17672
DNA (984bp) protein (328aa)
Transcriptional regulator, AraC family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FYQ6_9SPHI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEI91942.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
DNA-binding domain-containing protein
scnpilot_p_inoc_scaffold_1291_curated_19
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17687..18748
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HZD9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ60927.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
DNA-binding domain-containing protein
scnpilot_p_inoc_scaffold_1291_curated_20
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18990..24011
DNA (5022bp) protein (1674aa)
Conserved repeat protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VPY5_9SPHI
Conserved repeat protein {ECO:0000313|EMBL:EFK55836.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1291_curated_21
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24082..24621
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Dokdonia donghaensis MED134 RepID=A2TPQ0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KDN55558.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
hypothetical protein
Displaying 21 items

View Taxonomy