ggKbase home page

scnpilot_p_inoc_scaffold_168_curated_95

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 105966..106691

Top 3 Functional Annotations

Value Algorithm Source
Response regulator of the LytR/AlgR family n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CNT4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 241.0
  • Bit_score: 336
  • Evalue 3.10e-89
Transcriptional regulatory protein YpdB {ECO:0000313|EMBL:AJW61523.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 240.0
  • Bit_score: 341
  • Evalue 1.00e-90
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 232.0
  • Bit_score: 315
  • Evalue 1.80e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Elizabethkingia sp. BM10 → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 726
ATGAATTGCATTATAGTAGATGATGAACCGCTGGCAAGAGAAGGTGTGCTGTCCATAGTTAGCAATATTGGTTCCATTCAGGTTATCGGATCGTTTTCGAATGCATTAACGGCATTGGATTTTATGAAGCACAACCCGGTTGACCTGATATTTCTGGACATACACCTGCCACAGGTAACCGGACTGGAATTTGCCGCACAGTTACCGAAAGAAACCTTAATAATATTTACAACGGCCTATCCGCAATATGCTTTAAAAAGCTATGAACTGGATGCGATTGATTATTTGCTGAAGCCTTTGGGAAAAGAACGGTTGGAAAAAGCGGTGAATAAAGCGGTTGCATACAAAAAACTGCTGTCGGCAGAAACTGTAAAAAATACCATTGAGGGCAACACAACCGATTTTTTGCTGATTAAATCGGACCGGCGTTATTATAAGGTTCCTTTCCAGGAAATACGGTTTATTGAAGGGCTTAAGGATTATATTGTTATCCATACGAATAAACAAAAGCTGATCACGGCAATGAATTTAAAAACGGTGCATCTGAAGATTGCCACCAAAAAAATGATCCGCGTCAGTAAATCGTATATTGTAAATATGGATCATATTGATTCTTTTGATAATCATACTATTTATATCGGTGAGTTTGAAATTCCGCTTGGGGAAATATTCCGGAAGGATTTCTTTGATAATTATTCCAAAGGGACTTTGGGAAGTGAGCTATAG
PROTEIN sequence
Length: 242
MNCIIVDDEPLAREGVLSIVSNIGSIQVIGSFSNALTALDFMKHNPVDLIFLDIHLPQVTGLEFAAQLPKETLIIFTTAYPQYALKSYELDAIDYLLKPLGKERLEKAVNKAVAYKKLLSAETVKNTIEGNTTDFLLIKSDRRYYKVPFQEIRFIEGLKDYIVIHTNKQKLITAMNLKTVHLKIATKKMIRVSKSYIVNMDHIDSFDNHTIYIGEFEIPLGEIFRKDFFDNYSKGTLGSEL*