ggKbase home page

scnpilot_p_inoc_scaffold_168_curated_96

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 107380..107757

Top 3 Functional Annotations

Value Algorithm Source
DNA mismatch endonuclease Vsr; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 125.0
  • Bit_score: 188
  • Evalue 1.00e-45
DNA mismatch endonuclease Vsr n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIW0_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 125.0
  • Bit_score: 188
  • Evalue 3.20e-45
Contig72, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76148.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 119.0
  • Bit_score: 195
  • Evalue 4.80e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 378
ATGAGTAAAATAAAAGGAAAGGATACTAAGCCTGAACTACTCGTAAGAAAGTTTCTTTTTTCACAAGGCTTTCGTTATCGCCTGCATGATAAAAAATTACCAGGTAAACCGGATGTTATTTTACCTAAGTATAAAACAGTAATATTTGTAAATGGATGTTTCTGGCATGGACACCAGGATTGTAAATATTTTGTTGTTCCTAAAACAAGAACAGAATGGTGGCTGAATAAAATAAATGTTAATATTTCAAATGATAACAAAGCCCTGTTAGCTTTGCAAAATTCAGGTTGGAAAGTAATTGTGATCTGGGAATGTGAACTAAAGCCTGAAAAAATAAATGTAACATTAAATCAATTACCCTTTTTAATACGAGATTAG
PROTEIN sequence
Length: 126
MSKIKGKDTKPELLVRKFLFSQGFRYRLHDKKLPGKPDVILPKYKTVIFVNGCFWHGHQDCKYFVVPKTRTEWWLNKINVNISNDNKALLALQNSGWKVIVIWECELKPEKINVTLNQLPFLIRD*