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scnpilot_p_inoc_scaffold_1872_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1872_curated_1
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(160..3072)
DNA (2913bp) protein (971aa)
Putative TnpA family transposase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SNQ4_METPP
Putative TnpA family transposase {ECO:0000313|EMBL:ABM97193.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
TnpA family transposase
scnpilot_p_inoc_scaffold_1872_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3164..4417
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSR4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92254.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TRAP dicarboxylate transporter subunit DctM
scnpilot_p_inoc_scaffold_1872_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4414..5490
DNA (1077bp) protein (359aa)
Aminoglycoside phosphotransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSR5_9BURK
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EIK92255.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
acyl-CoA dehydrogenase
scnpilot_p_inoc_scaffold_1872_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5487..5942
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSR6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92256.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1872_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5948..7063
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSR7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92257.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1872_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7085..8638
DNA (1554bp) protein (518aa)
Long-chain-fatty-acid CoA ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSR8_9BURK
Long-chain-fatty-acid CoA ligase {ECO:0000313|EMBL:EIK92258.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
AMP-dependent synthetase and ligase
scnpilot_p_inoc_scaffold_1872_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8580..9242)
DNA (663bp) protein (221aa)
Transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSR9_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EIK92259.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
bacterial regulatory, tetR family protein
scnpilot_p_inoc_scaffold_1872_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9358..10623
DNA (1266bp) protein (422aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00529 ferredoxin--NAD+ reductase [EC:1.18.1.3]
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSS0_9BURK
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EIK92260.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1872_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10755..11585
DNA (831bp) protein (277aa)
ABC transporter-like protein {ECO:0000313|EMBL:EIK92261.1}; EC=3.6.1.15 {ECO:0000313|EMBL:EIK92261.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSS1_9BURK
amino acid/amide ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_p_inoc_scaffold_1872_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11582..12373
DNA (792bp) protein (264aa)
ABC transporter-like protein {ECO:0000313|EMBL:EIK92262.1}; EC=3.6.1.15 {ECO:0000313|EMBL:EIK92262.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSS2_9BURK
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
scnpilot_p_inoc_scaffold_1872_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12366..14228
DNA (1863bp) protein (621aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
AMP-dependent synthetase and ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSS3_9BURK
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EIK92263.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1872_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14287..15159
DNA (873bp) protein (291aa)
ABC transporter permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSS4_9BURK
ABC transporter permease {ECO:0000313|EMBL:EIK92264.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
scnpilot_p_inoc_scaffold_1872_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15159..16205
DNA (1047bp) protein (349aa)
High-affinity branched-chain amino acid transport system permease protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSS5_9BURK
High-affinity branched-chain amino acid transport system permease protein {ECO:0000313|EMBL:EIK92265.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
scnpilot_p_inoc_scaffold_1872_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16362..17519
DNA (1158bp) protein (386aa)
Branched chain amino acid ABC transporter substrate-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSS6_9BURK
Branched chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EIK92266.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
extracellular ligand-binding receptor
scnpilot_p_inoc_scaffold_1872_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17542..18135)
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSS7_9BURK
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EIK92267.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_1872_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18278..19249
DNA (972bp) protein (324aa)
acyl-CoA dehydrogenase-like; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Acyl-CoA dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSS8_9BURK
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EIK92268.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Displaying 16 items

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