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scnpilot_p_inoc_scaffold_1396_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1396_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..106
DNA (105bp) protein (35aa)
GntR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMR7_9BURK
GntR family transcriptional regulator {ECO:0000313|EMBL:EIK90507.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1396_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(142..525)
DNA (384bp) protein (128aa)
Thioredoxin domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMR6_9BURK
Thioredoxin domain-containing protein {ECO:0000313|EMBL:EIK90506.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1396_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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632..1828
DNA (1197bp) protein (399aa)
ROK family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMR5_9BURK
ROK family transcriptional regulator {ECO:0000313|EMBL:EIK90505.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ROK family transcriptional regulator
scnpilot_p_inoc_scaffold_1396_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1969..3462
DNA (1494bp) protein (498aa)
Ribose transport ATP-binding protein RbsA {ECO:0000313|EMBL:EIK90504.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EIK90504.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
rbsA; ribose transport ATP-binding protein (EC:3.6.3.17); K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
Ribose transport ATP-binding protein RbsA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMR4_9BURK
scnpilot_p_inoc_scaffold_1396_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3443..4444
DNA (1002bp) protein (334aa)
Inner-membrane translocator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMR3_9BURK
Inner-membrane translocator {ECO:0000313|EMBL:EIK90503.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Ribose/xylose/arabinose/galactoside ABC transporter permease; K10440 ribose transport system permease protein
scnpilot_p_inoc_scaffold_1396_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4504..5466
DNA (963bp) protein (321aa)
ABC ribose transporter, periplasmic solute-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMR2_9BURK
ABC ribose transporter, periplasmic solute-binding protein {ECO:0000313|EMBL:EIK90502.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
rbsB; d-ribose-binding periplasmic protein; K10439 ribose transport system substrate-binding protein
scnpilot_p_inoc_scaffold_1396_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5592..6650
DNA (1059bp) protein (353aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMR1_9BURK
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EIK90501.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative AP endonuclease, family 2
scnpilot_p_inoc_scaffold_1396_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6647..7792
DNA (1146bp) protein (382aa)
Oxidoreductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMR0_9BURK
Oxidoreductase {ECO:0000313|EMBL:EIK90500.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
oxidoreductase
scnpilot_p_inoc_scaffold_1396_curated_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7917..8639
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000382E1C2
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:GAO24674.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_1396_curated_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8636..10312
DNA (1677bp) protein (559aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000378FBAF
FecR protein {ECO:0000313|EMBL:GAO21223.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
FecR protein
scnpilot_p_inoc_scaffold_1396_curated_11
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10335..12662
DNA (2328bp) protein (776aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NBRC 15126 = ATCC 27061.;"
Probable two-component sensor protein n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XNR1_ALCXX
probable two-component sensor protein
scnpilot_p_inoc_scaffold_1396_curated_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12979..19746
DNA (6768bp) protein (2256aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036BCD6C
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35270.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1396_curated_13
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19758..21419
DNA (1662bp) protein (554aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037EEF3A
Flagellar motor protein MotB {ECO:0000313|EMBL:EZH76759.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
hypothetical protein
Displaying 13 items

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