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scnpilot_p_inoc_scaffold_4056_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4056_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..697
DNA (696bp) protein (232aa)
Dipeptide/oligopeptide ABC transporter {ECO:0000313|EMBL:EIK92062.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIK92062.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Dipeptide/oligopeptide ABC transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MS72_9BURK
peptide ABC transporter ATPase
scnpilot_p_inoc_scaffold_4056_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(701..1549)
DNA (849bp) protein (283aa)
RpiR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRL6_9BURK
RpiR family transcriptional regulator {ECO:0000313|EMBL:EIK91856.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hexR; transcriptional regulator HexR
scnpilot_p_inoc_scaffold_4056_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1613..2554
DNA (942bp) protein (314aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Transaldolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRL7_9BURK
transaldolase-like
scnpilot_p_inoc_scaffold_4056_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2753..4399)
DNA (1647bp) protein (549aa)
60 kDa chaperonin n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRL8_9BURK
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
groL; molecular chaperone GroEL; K04077 chaperonin GroEL
scnpilot_p_inoc_scaffold_4056_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4437..4727)
DNA (291bp) protein (97aa)
10 kDa chaperonin n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRL9_9BURK
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
groS; 10 kDa chaperonin GroS
scnpilot_p_inoc_scaffold_4056_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4897..6444)
DNA (1548bp) protein (516aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MH78_9BURK
aphA; Cyanobacterial phytochrome A
scnpilot_p_inoc_scaffold_4056_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6675..7382
DNA (708bp) protein (236aa)
Putative Crp/Fnr family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MH77_9BURK
Putative Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EIK88567.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cyclic nucleotide-binding protein
scnpilot_p_inoc_scaffold_4056_curated_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7379..8785)
DNA (1407bp) protein (469aa)
Aerotaxis sensor receptor (Chemotaxis transducer) transmembrane protein id=1266402 bin=GWE1_Burkholderiales_65_30 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
aer; fused signal transducer for aerotaxis sensory component ; methyl accepting chemotaxis component; K03776 aerotaxis receptor
Tax=GWE1_Burkholderiales_65_30_curated
scnpilot_p_inoc_scaffold_4056_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8936..9700)
DNA (765bp) protein (255aa)
gno; gluconate 5-dehydrogenase (EC:1.1.1.69); K00046 gluconate 5-dehydrogenase [EC:1.1.1.69]
Gluconate 5-dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRM0_9BURK
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:EIK91860.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_4056_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9742..11763)
DNA (2022bp) protein (674aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRM1_9BURK
PAS domain-containing protein
scnpilot_p_inoc_scaffold_4056_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11994..13178)
DNA (1185bp) protein (395aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
s-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRM2_9BURK
scnpilot_p_inoc_scaffold_4056_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13328..14158
DNA (831bp) protein (277aa)
putative acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
Putative acyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRM3_9BURK
Putative acyltransferase {ECO:0000313|EMBL:EIK91863.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_4056_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14158..15087
DNA (930bp) protein (310aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRM4_9BURK
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:EIK91864.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
htrB-1; lipid A biosynthesis lauroyl acyltransferase
scnpilot_p_inoc_scaffold_4056_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15097..15801)
DNA (705bp) protein (235aa)
Probable GTP-binding protein EngB n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRM5_9BURK
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein
scnpilot_p_inoc_scaffold_4056_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15912..16526
DNA (615bp) protein (205aa)
Cytochrome c class i n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRM6_9BURK
Cytochrome c class i {ECO:0000313|EMBL:EIK91866.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cytochrome c class i
scnpilot_p_inoc_scaffold_4056_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16709..16930
DNA (222bp) protein (74aa)
ResB family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRM7_9BURK
ResB family protein {ECO:0000313|EMBL:EIK91867.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ccs1_resB; Cytochrome c-type biogenesis protein Ccs1/ResB
Displaying 16 items

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