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scnpilot_p_inoc_scaffold_1938_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1938_curated_1
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..563
DNA (561bp) protein (187aa)
Amidohydrolase 2 id=1261920 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Putative metal-dependent hydrolase of the TIM-barrel fold protein {ECO:0000313|EMBL:EWS64796.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; K07045
scnpilot_p_inoc_scaffold_1938_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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560..2407
DNA (1848bp) protein (616aa)
AMP-binding protein; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Acyl-CoA synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MU08_9BURK
Acyl-CoA synthase {ECO:0000313|EMBL:EIK92698.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1938_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2426..3142)
DNA (717bp) protein (239aa)
Putative 2-hydroxychromene-2-carboxylate isomerase (HCCA isomerase) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MU06_9BURK
Putative 2-hydroxychromene-2-carboxylate isomerase (HCCA isomerase) {ECO:0000313|EMBL:EIK92696.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
2-hydroxychromene-2-carboxylate isomerase
scnpilot_p_inoc_scaffold_1938_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3206..4246
DNA (1041bp) protein (347aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MU05_9BURK
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:EIK92695.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TRAP transporter solute receptor
scnpilot_p_inoc_scaffold_1938_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4298..5419)
DNA (1122bp) protein (374aa)
Methionine synthase vitamin-b12 independent {ECO:0000313|EMBL:EIK92694.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EIK92694.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
methionine synthase vitamin-b12 independent; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
Methionine synthase vitamin-b12 independent n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MU04_9BURK
scnpilot_p_inoc_scaffold_1938_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5581..6672
DNA (1092bp) protein (364aa)
Rieske (2fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:EIK92693.1}; EC=1.14.13.82 {ECO:0000313|EMBL:EIK92693.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
rieske (2fe-2S) iron-sulfur domain; K03862 vanillate monooxygenase [EC:1.14.13.82]
Rieske (2fe-2S) iron-sulfur domain protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MU03_9BURK
scnpilot_p_inoc_scaffold_1938_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6677..7441
DNA (765bp) protein (255aa)
GntR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MU02_9BURK
GntR family transcriptional regulator {ECO:0000313|EMBL:EIK92692.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
GntR family transcriptional regulator; K11475 GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
scnpilot_p_inoc_scaffold_1938_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7447..8439
DNA (993bp) protein (331aa)
oxidoreductase FAD-binding subunit; K03863 vanillate monooxygenase [EC:1.14.13.82]
Oxidoreductase FAD-binding subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MU01_9BURK
Oxidoreductase FAD-binding subunit {ECO:0000313|EMBL:EIK92691.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1938_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8618..9652
DNA (1035bp) protein (345aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MU00_9BURK
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:EIK92690.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TRAP transporter solute receptor
scnpilot_p_inoc_scaffold_1938_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9768..10286
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTZ9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92689.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1938_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10286..11596
DNA (1311bp) protein (437aa)
TRAP dicarboxylate transporter, permease component n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTZ8_9BURK
TRAP dicarboxylate transporter, permease component {ECO:0000313|EMBL:EIK92688.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TRAP dicarboxylate transporter subunit DctM
scnpilot_p_inoc_scaffold_1938_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11608..12570
DNA (963bp) protein (321aa)
TctC n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTZ7_9BURK
TctC {ECO:0000313|EMBL:EIK92687.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1938_curated_13
unknown

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comp(12574..14469)
DNA (1896bp) protein (632aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1938_curated_14
unknown

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comp(14481..14954)
DNA (474bp) protein (158aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1938_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15120..15497)
DNA (378bp) protein (126aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTZ6_9BURK
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:EIK92686.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative histidine kinase
Displaying 15 items

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