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scnpilot_p_inoc_scaffold_3228_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3228_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..900)
DNA (900bp) protein (300aa)
tRNA and rRNA cytosine-C5-methylase-like protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Fmu (Sun) domain protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQS5_9BURK
Fmu (Sun) domain protein {ECO:0000313|EMBL:EIK91565.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_3228_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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937..2556
DNA (1620bp) protein (540aa)
Peptide chain release factor 3 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQS4_9BURK
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
prfC; peptide chain release factor 3; K02837 peptide chain release factor 3
scnpilot_p_inoc_scaffold_3228_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2595..3365
DNA (771bp) protein (257aa)
Transcriptional regulator, AraC family n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQS3_9BURK
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EIK91563.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_3228_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3451..4068
DNA (618bp) protein (206aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQS2_9BURK
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:EIK91562.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
amino acid transporter LysE
scnpilot_p_inoc_scaffold_3228_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4086..4625)
DNA (540bp) protein (180aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
purN; 5 -phosphoribosylglycinamide transformylase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
Phosphoribosylglycinamide formyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQS1_9BURK
scnpilot_p_inoc_scaffold_3228_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4809..5990
DNA (1182bp) protein (394aa)
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:EIK91560.1}; EC=1.3.8.- {ECO:0000313|EMBL:EIK91560.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Isovaleryl-CoA dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQS0_9BURK
isovaleryl-CoA dehydrogenase
scnpilot_p_inoc_scaffold_3228_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6001..7116
DNA (1116bp) protein (372aa)
Acyl-CoA dehydrogenase-like protein {ECO:0000313|EMBL:EIK91559.1}; EC=1.3.8.- {ECO:0000313|EMBL:EIK91559.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
butyryl-CoA dehydrogenase; K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQR9_9BURK
scnpilot_p_inoc_scaffold_3228_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7201..7758)
DNA (558bp) protein (186aa)
HNH endonuclease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQR8_9BURK
HNH endonuclease {ECO:0000313|EMBL:EIK91558.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
HNH endonuclease
scnpilot_p_inoc_scaffold_3228_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7922..8986
DNA (1065bp) protein (355aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
bifunctional riboflavin kinase/FMN adenylyltransferase; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
Bifunctional riboflavin kinase/FMN adenylyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQR7_9BURK
scnpilot_p_inoc_scaffold_3228_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9104..10210
DNA (1107bp) protein (369aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ileS; isoleucyl-tRNA synthetase IleS (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQR6_9BURK
Displaying 10 items

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