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scnpilot_p_inoc_scaffold_1235_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1235_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1558)
DNA (1557bp) protein (519aa)
Isocitrate dehydrogenase, NADP-dependent {ECO:0000313|EMBL:EIK92443.1}; EC=1.1.1.42 {ECO:0000313|EMBL:EIK92443.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
isocitrate dehydrogenase, NADP-dependent (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase, NADP-dependent n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTA3_9BURK
scnpilot_p_inoc_scaffold_1235_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1799..2380)
DNA (582bp) protein (194aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTA2_9BURK
scnpilot_p_inoc_scaffold_1235_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2470..3768)
DNA (1299bp) protein (433aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTA1_9BURK
exodeoxyribonuclease VII large subunit
scnpilot_p_inoc_scaffold_1235_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4124..4762
DNA (639bp) protein (213aa)
Biopolymer transport protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTA0_9BURK
Biopolymer transport protein {ECO:0000313|EMBL:EIK92440.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB
scnpilot_p_inoc_scaffold_1235_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4759..5202
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT99_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92439.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
scnpilot_p_inoc_scaffold_1235_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5210..6250
DNA (1041bp) protein (347aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.4.1.182); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
Tetraacyldisaccharide 4'-kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT98_9BURK
scnpilot_p_inoc_scaffold_1235_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6280..6489
DNA (210bp) protein (70aa)
UPF0434 protein Q5W_0569 (Fragment) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT97_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92437.1}; Flags: Fragment;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K09791 hypothetical protein
scnpilot_p_inoc_scaffold_1235_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6492..7250
DNA (759bp) protein (253aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|SAAS:SAAS00089008};; Flags: Fragment;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
3-deoxy-manno-octulosonate cytidylyltransferase (Fragment) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MS58_9BURK
scnpilot_p_inoc_scaffold_1235_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7392..8048
DNA (657bp) protein (219aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MS57_9BURK
scnpilot_p_inoc_scaffold_1235_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8188..10917
DNA (2730bp) protein (910aa)
Outer membrane autotransporter barrel domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MH37_9BURK
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:EIK88527.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
outer membrane autotransporter barrel domain-containing protein
scnpilot_p_inoc_scaffold_1235_curated_11
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11112..12371
DNA (1260bp) protein (420aa)
Natural resistance-associated macrophage protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X779_METSD
Pseudomonas putida strain UASWS0946 Contig191, whole genome shotgun sequence {ECO:0000313|EMBL:KIU42709.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
natural resistance-associated macrophage protein
scnpilot_p_inoc_scaffold_1235_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12519..13475)
DNA (957bp) protein (319aa)
asparaginase/glutaminase; K01424 L-asparaginase [EC:3.5.1.1]
Putative L-asparaginase (Fragment) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY9_9BURK
Putative L-asparaginase {ECO:0000313|EMBL:EIK89529.1}; Flags: Fragment;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1235_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13567..14250
DNA (684bp) protein (228aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY8_9BURK
scnpilot_p_inoc_scaffold_1235_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14384..14683
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89527.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1235_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14732..15739
DNA (1008bp) protein (336aa)
D-isomer specific 2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:EIK89526.1}; EC=1.1.1.- {ECO:0000313|EMBL:EIK89526.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
D-isomer specific 2-hydroxyacid dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY6_9BURK
scnpilot_p_inoc_scaffold_1235_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15794..17911)
DNA (2118bp) protein (706aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89525.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1235_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17986..19506
DNA (1521bp) protein (507aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EIK89524.1}; EC=1.1.1.35 {ECO:0000313|EMBL:EIK89524.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY4_9BURK
scnpilot_p_inoc_scaffold_1235_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19600..20379
DNA (780bp) protein (260aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EIK89523.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EIK89523.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Enoyl-CoA hydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY3_9BURK
unsaturated acyl-CoA hydratase
scnpilot_p_inoc_scaffold_1235_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20461..21180
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89522.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Crp/Fnr family transcriptional regulator
scnpilot_p_inoc_scaffold_1235_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21209..22294
DNA (1086bp) protein (362aa)
Aminoglycoside phosphotransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY1_9BURK
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EIK89521.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
aminoglycoside phosphotransferase; K06979
scnpilot_p_inoc_scaffold_1235_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22325..23584
DNA (1260bp) protein (420aa)
Acyl-CoA dehydrogenase-like protein {ECO:0000313|EMBL:EIK89520.1}; EC=1.3.8.- {ECO:0000313|EMBL:EIK89520.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
acyl-CoA dehydrogenase-like protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Acyl-CoA dehydrogenase-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJY0_9BURK
scnpilot_p_inoc_scaffold_1235_curated_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23584..24288
DNA (705bp) protein (235aa)
glutathione S-transferase-like protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJX9_9BURK
Glutathione S-transferase-like protein {ECO:0000313|EMBL:EIK89519.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Displaying 22 items

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