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scnpilot_p_inoc_scaffold_1686_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1686_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1212
DNA (1212bp) protein (404aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-]
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT26_9BURK
scnpilot_p_inoc_scaffold_1686_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1390..3408
DNA (2019bp) protein (673aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
His Kinase A phosphoacceptor domain-containing protein 1 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT25_9BURK
LadS protein
scnpilot_p_inoc_scaffold_1686_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3295..3738)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT24_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92364.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1686_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3858..5003
DNA (1146bp) protein (382aa)
NAD(P)(+) transhydrogenase {ECO:0000313|EMBL:EIK92118.1}; EC=1.6.1.1 {ECO:0000313|EMBL:EIK92118.1};; Flags: Fragment;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
NAD(P)(+) transhydrogenase (EC:1.6.1.2); K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]
NAD(P) transhydrogenase subunit alpha (Fragment) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSC8_9BURK
scnpilot_p_inoc_scaffold_1686_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5000..5374
DNA (375bp) protein (125aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
aspartate alpha-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11]
Aspartate 1-decarboxylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSC7_9BURK
scnpilot_p_inoc_scaffold_1686_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5384..5704
DNA (321bp) protein (107aa)
NAD(P) transhydrogenase subunit alpha part 2; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]
NAD(P) transhydrogenase n=1 Tax=Curvibacter lanceolatus RepID=UPI00036BB434
NAD(P) transhydrogenase subunit alpha part 2 {ECO:0000313|EMBL:EIK92116.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1686_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5701..7122
DNA (1422bp) protein (474aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
NAD(P)(+) transhydrogenase (EC:1.6.1.2); K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2]
NAD(P) transhydrogenase subunit beta n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSC5_9BURK
scnpilot_p_inoc_scaffold_1686_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7161..8846
DNA (1686bp) protein (562aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSG2_9BURK
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EIK92152.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
AMP-dependent synthetase and ligase
scnpilot_p_inoc_scaffold_1686_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8861..9613
DNA (753bp) protein (251aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Mta/sah nucleosidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSG1_9BURK
putative MTA/SAH nucleosidase
scnpilot_p_inoc_scaffold_1686_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9605..10591)
DNA (987bp) protein (329aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSG0_9BURK
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
magnesium and cobalt transport protein CorA
scnpilot_p_inoc_scaffold_1686_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10786..12036)
DNA (1251bp) protein (417aa)
Patatin n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSF9_9BURK
Patatin {ECO:0000313|EMBL:EIK92149.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
patatin; K07001 NTE family protein
scnpilot_p_inoc_scaffold_1686_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12337..13569
DNA (1233bp) protein (411aa)
Major facilitator superfamily transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSF7_9BURK
Major facilitator superfamily transporter {ECO:0000313|EMBL:EIK92147.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
major facilitator superfamily transporter
scnpilot_p_inoc_scaffold_1686_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13717..14046
DNA (330bp) protein (110aa)
Sigma 54 modulation protein/30S ribosomal protein S30P n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSF6_9BURK
Sigma 54 modulation protein/30S ribosomal protein S30P {ECO:0000313|EMBL:EIK92146.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
sigma 54 modulation protein/30S ribosomal protein S30P; K05808 putative sigma-54 modulation protein
scnpilot_p_inoc_scaffold_1686_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14190..14660
DNA (471bp) protein (157aa)
Pts iia-like nitrogen-regulatory protein {ECO:0000313|EMBL:EIK92145.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EIK92145.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69]
Pts iia-like nitrogen-regulatory protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSF5_9BURK
scnpilot_p_inoc_scaffold_1686_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14674..15624
DNA (951bp) protein (317aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.
HPr kinase/phosphorylase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
HPr kinase/phosphorylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSF4_9BURK
scnpilot_p_inoc_scaffold_1686_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15637..16089)
DNA (453bp) protein (151aa)
Ferric uptake regulation protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSF3_9BURK
Ferric uptake regulation protein {ECO:0000313|EMBL:EIK92143.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
scnpilot_p_inoc_scaffold_1686_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16191..16718
DNA (528bp) protein (176aa)
Outer membrane protein assembly factor BamE n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSF2_9BURK
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Outer membrane lipoprotein omlA; K06186 small protein A
scnpilot_p_inoc_scaffold_1686_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16715..17464
DNA (750bp) protein (250aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSF1_9BURK
Displaying 18 items

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