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scnpilot_p_inoc_scaffold_3663_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3663_curated_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..128
DNA (126bp) protein (42aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Superoxide dismutase n=1 Tax=Polaromonas sp. CF318 RepID=J2KKC3_9BURK
superoxide dismutase [Fe]-like
scnpilot_p_inoc_scaffold_3663_curated_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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430..2544
DNA (2115bp) protein (705aa)
isocitrate dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036A856C
Isocitrate dehydrogenase {ECO:0000313|EMBL:GAD21965.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
isocitrate dehydrogenase [NADP]-like
scnpilot_p_inoc_scaffold_3663_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2727..3176)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTA4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92444.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K09005 hypothetical protein
scnpilot_p_inoc_scaffold_3663_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3314..4570
DNA (1257bp) protein (419aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
icdA; isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase [NADP] n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTA5_9BURK
scnpilot_p_inoc_scaffold_3663_curated_5
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4581..5654)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z410_9RHOO
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
scnpilot_p_inoc_scaffold_3663_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5645..6304)
DNA (660bp) protein (220aa)
uracil-DNA glycosylase id=12553153 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_3663_curated_7
Dictyostelium discoideum, Dictyostelium, Dictyosteliida, Eukaryota

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comp(6472..6747)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54BK4_DICDI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAL60605.1}; TaxID=44689 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium discoideum (Slime mold).;"
scnpilot_p_inoc_scaffold_3663_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6885..7181
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTA8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92448.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3663_curated_9
unknown

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7280..7528
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3663_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7618..9072)
DNA (1455bp) protein (485aa)
RNA polymerase sigma-54 factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTA9_9BURK
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
rpoN; RNA polymerase sigma-54 factor RpoN; K03092 RNA polymerase sigma-54 factor
scnpilot_p_inoc_scaffold_3663_curated_11
unknown

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comp(9330..9791)
DNA (462bp) protein (154aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3663_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9885..11360
DNA (1476bp) protein (492aa)
integral membrane sensor hybrid histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTB0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92450.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Displaying 12 items

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