ggKbase home page

scnpilot_p_inoc_scaffold_3851_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3851_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..184)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNT6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90876.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_3851_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

246..1130
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNT7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90877.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3851_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1127..1942
DNA (816bp) protein (272aa)
Molybdopterin binding domain protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNT8_9BURK
Molybdopterin binding domain protein {ECO:0000313|EMBL:EIK90878.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3851_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2112..3527
DNA (1416bp) protein (472aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
type I glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNT9_9BURK
scnpilot_p_inoc_scaffold_3851_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3703..4194
DNA (492bp) protein (164aa)
Signal peptide protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNU0_9BURK
Signal peptide protein {ECO:0000313|EMBL:EIK90880.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
signal peptide protein
scnpilot_p_inoc_scaffold_3851_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4237..5370
DNA (1134bp) protein (378aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
signal transduction histidine kinase NtrB (EC:2.7.3.-); K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
Signal transduction histidine kinase NtrB n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNU1_9BURK
scnpilot_p_inoc_scaffold_3851_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5418..6959
DNA (1542bp) protein (514aa)
Nitrogen metabolism transcriptional regulator NtrC {ECO:0000313|EMBL:EIK90882.1}; EC=3.6.1.15 {ECO:0000313|EMBL:EIK90882.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Nitrogen metabolism transcriptional regulator NtrC n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNU2_9BURK
response regulator NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG
scnpilot_p_inoc_scaffold_3851_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6975..7751)
DNA (777bp) protein (259aa)
exodeoxyribonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exodeoxyribonuclease iii xth n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNU3_9BURK
Exodeoxyribonuclease iii xth {ECO:0000313|EMBL:EIK90883.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_3851_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7748..8269)
DNA (522bp) protein (174aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNU8_9BURK
scnpilot_p_inoc_scaffold_3851_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8275..9135)
DNA (861bp) protein (287aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45]
Thymidylate synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNU9_9BURK
scnpilot_p_inoc_scaffold_3851_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9154..10107)
DNA (954bp) protein (318aa)
Lytic transglycosylase, catalytic n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNV0_9BURK
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:EIK90890.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
lytic transglycosylase subunit
scnpilot_p_inoc_scaffold_3851_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10149..11354)
DNA (1206bp) protein (402aa)
D-lactate dehydrogenase (cytochrome) (EC:1.1.2.4)
Fad linked oxidase domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNV1_9BURK
Fad linked oxidase domain-containing protein {ECO:0000313|EMBL:EIK90891.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Displaying 12 items

View Taxonomy