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scnpilot_p_inoc_scaffold_2771_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2771_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..368
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPD9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91079.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2771_curated_2
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

441..875
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000318C35D
Uncharacterized protein {ECO:0000313|EMBL:KGM57824.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2771_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(886..1545)
DNA (660bp) protein (220aa)
Peroxidase {ECO:0000313|EMBL:EIK91080.1}; EC=1.11.1.7 {ECO:0000313|EMBL:EIK91080.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
peroxidase (EC:1.11.1.7)
Peroxidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPE0_9BURK
scnpilot_p_inoc_scaffold_2771_curated_4
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1624..2031
DNA (408bp) protein (136aa)
hypothetical protein id=5079498 bin=GWF1_Burkholderiales_GWF1_66_17 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_2771_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2046..4175)
DNA (2130bp) protein (710aa)
GETHR pentapeptide n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPE1_9BURK
GETHR pentapeptide {ECO:0000313|EMBL:EIK91081.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
GETHR pentapeptide
scnpilot_p_inoc_scaffold_2771_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4352..4564
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPE2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91082.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2771_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4602..5945)
DNA (1344bp) protein (448aa)
Probable D-serine dehydratase {ECO:0000256|HAMAP-Rule:MF_01030}; EC=4.3.1.18 {ECO:0000256|HAMAP-Rule:MF_01030};; D-serine deaminase {ECO:0000256|HAMAP-Rule:MF_01030}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
D-serine dehydratase (EC:4.3.1.18); K01753 D-serine dehydratase [EC:4.3.1.18]
Probable D-serine dehydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTU5_9BURK
scnpilot_p_inoc_scaffold_2771_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5945..6718)
DNA (774bp) protein (258aa)
Class II aldolase/adducin family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTU6_9BURK
Class II aldolase/adducin family protein {ECO:0000313|EMBL:EIK92636.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ribulose-5-phosphate 4-epimerase
scnpilot_p_inoc_scaffold_2771_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6797..8074)
DNA (1278bp) protein (426aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTU7_9BURK
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EIK92637.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TRAP dicarboxylate transporter subunit DctM
scnpilot_p_inoc_scaffold_2771_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8067..8528)
DNA (462bp) protein (154aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTU8_9BURK
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:EIK92638.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Tripartite ATP-independent periplasmic transporter DctQ component
scnpilot_p_inoc_scaffold_2771_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8541..9560)
DNA (1020bp) protein (340aa)
Trap dicarboxylate subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTU9_9BURK
Trap dicarboxylate subunit {ECO:0000313|EMBL:EIK92639.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TRAP dicarboxylate transporter subunit DctP
scnpilot_p_inoc_scaffold_2771_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9726..10430
DNA (705bp) protein (235aa)
Transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTV0_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EIK92640.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transcriptional regulator, GntR family
scnpilot_p_inoc_scaffold_2771_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10423..11877
DNA (1455bp) protein (485aa)
N-acyl-D-amino-acid deacylase (EC:3.5.1.81); K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
N-acyl-D-amino-acid deacylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTV1_9BURK
N-acyl-D-amino-acid deacylase {ECO:0000313|EMBL:EIK92641.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_2771_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11918..12745)
DNA (828bp) protein (276aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTV2_9BURK
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EIK92642.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein
scnpilot_p_inoc_scaffold_2771_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12774..13661)
DNA (888bp) protein (296aa)
ABC transporter {ECO:0000313|EMBL:EIK92643.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIK92643.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTV3_9BURK
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
scnpilot_p_inoc_scaffold_2771_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13663..14160)
DNA (498bp) protein (166aa)
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTV4_9BURK
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein {ECO:0000313|EMBL:EIK92644.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative ABC transporter substrate binding protein
Displaying 16 items

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