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scnpilot_p_inoc_scaffold_2204_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2204_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..577
DNA (576bp) protein (192aa)
dehydrogenase-like protein; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Dehydrogenase-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIX2_9BURK
Dehydrogenase-like protein {ECO:0000313|EMBL:EIK89162.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_2204_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

592..1707
DNA (1116bp) protein (372aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIX1_9BURK
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein
scnpilot_p_inoc_scaffold_2204_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1723..2352
DNA (630bp) protein (210aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256
Molybdenum cofactor guanylyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIX0_9BURK
molybdopterin-guanine dinucleotide biosynthesis protein MobA
scnpilot_p_inoc_scaffold_2204_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2349..3623
DNA (1275bp) protein (425aa)
molybdopterin molybdochelatase; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
Molybdenum cofactor synthesis domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIW9_9BURK
Molybdenum cofactor synthesis domain-containing protein {ECO:0000313|EMBL:EIK89159.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_2204_curated_5
unknown

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3745..4269
DNA (525bp) protein (175aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2204_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4276..7371)
DNA (3096bp) protein (1032aa)
Acriflavin resistance protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGN0_9BURK
Acriflavin resistance protein {ECO:0000313|EMBL:EIK88370.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_p_inoc_scaffold_2204_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7402..8547)
DNA (1146bp) protein (382aa)
Secretion protein HlyD n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGM9_9BURK
Secretion protein HlyD {ECO:0000313|EMBL:EIK88369.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
periplasmic linker protein
scnpilot_p_inoc_scaffold_2204_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8735..9181)
DNA (447bp) protein (149aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ribonuclease h; K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGM8_9BURK
scnpilot_p_inoc_scaffold_2204_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9236..10003)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGM7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88367.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2204_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10072..10845
DNA (774bp) protein (258aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGM6_9BURK
scnpilot_p_inoc_scaffold_2204_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10842..12482
DNA (1641bp) protein (547aa)
peptidoglycan lytic transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-]
Lytic transglycosylase catalytic n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGM5_9BURK
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EIK88365.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_2204_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12507..13565)
DNA (1059bp) protein (353aa)
Twin-arginine translocation pathway signal protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGM4_9BURK
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:EIK88364.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
twin-arginine translocation pathway signal protein; K02051 NitT/TauT family transport system substrate-binding protein
scnpilot_p_inoc_scaffold_2204_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13648..14250)
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGM3_9BURK
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
recR; recombination protein RecR; K06187 recombination protein RecR
scnpilot_p_inoc_scaffold_2204_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14262..14594)
DNA (333bp) protein (111aa)
Nucleoid-associated protein Q5W_4756 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGM2_9BURK
Nucleoid-associated protein Q5W_4756 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K09747 hypothetical protein
scnpilot_p_inoc_scaffold_2204_curated_15
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14707..16662)
DNA (1956bp) protein (652aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunits gamma and tau id=1269726 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_2204_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16844..17197
DNA (354bp) protein (118aa)
Dopa 45-dioxygenase {ECO:0000313|EMBL:EIK91325.1}; EC=1.13.11.- {ECO:0000313|EMBL:EIK91325.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
aromatic ring-cleaving dioxygenase-like protein; K10253 DOPA 4,5-dioxygenase [EC:1.14.99.-]
Dopa 45-dioxygenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQ35_9BURK
scnpilot_p_inoc_scaffold_2204_curated_17
unknown

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comp(17337..18248)
DNA (912bp) protein (304aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2204_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18418..19734)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQ36_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91326.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K07007
scnpilot_p_inoc_scaffold_2204_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19731..23003)
DNA (3273bp) protein (1091aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ATP-dependent nuclease subunit A n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQ37_9BURK
addA; ATP-dependent nuclease subunit A
scnpilot_p_inoc_scaffold_2204_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23000..24856)
DNA (1857bp) protein (619aa)
Exonuclease-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQ38_9BURK
Exonuclease-like protein {ECO:0000313|EMBL:EIK91328.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
exonuclease-like protein
Displaying 20 items

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