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scnpilot_p_inoc_scaffold_2368_curated

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2368_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..212
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT27_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92367.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2368_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

209..739
DNA (531bp) protein (177aa)
Cytochrome B561 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT28_9BURK
Cytochrome B561 {ECO:0000313|EMBL:EIK92368.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cytochrome B561
scnpilot_p_inoc_scaffold_2368_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

775..1185
DNA (411bp) protein (137aa)
Class i peptide chain release factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT29_9BURK
Class i peptide chain release factor {ECO:0000313|EMBL:EIK92369.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
class I peptide chain release factor; K15034 ribosome-associated protein
scnpilot_p_inoc_scaffold_2368_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1361..2104
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT30_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92370.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2368_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2113..3483)
DNA (1371bp) protein (457aa)
Putative GAF sensor protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT31_9BURK
Putative GAF sensor protein {ECO:0000313|EMBL:EIK92371.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
GAF sensor protein
scnpilot_p_inoc_scaffold_2368_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3491..4012)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT32_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92372.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2368_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4099..4701
DNA (603bp) protein (201aa)
TetR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT33_9BURK
TetR family transcriptional regulator {ECO:0000313|EMBL:EIK92373.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_2368_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4772..5659
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT34_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92374.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2368_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5681..6157)
DNA (477bp) protein (159aa)
MarR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT35_9BURK
MarR family transcriptional regulator {ECO:0000313|EMBL:EIK92375.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_2368_curated_10
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6265..7467
DNA (1203bp) protein (401aa)
salicylate hydroxylase; K00480 salicylate hydroxylase [EC:1.14.13.1]
Monooxygenase FAD-binding n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y527_LEPCP
Monooxygenase FAD-binding {ECO:0000313|EMBL:ACB35923.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
scnpilot_p_inoc_scaffold_2368_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7485..8543
DNA (1059bp) protein (353aa)
Cupin {ECO:0000313|EMBL:EIK92376.1}; EC=1.13.11.4 {ECO:0000313|EMBL:EIK92376.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cupin; K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4]
Cupin n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT36_9BURK
scnpilot_p_inoc_scaffold_2368_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8558..9259
DNA (702bp) protein (234aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT37_9BURK
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:EIK92377.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
fumarylacetoacetate (FAA) hydrolase
scnpilot_p_inoc_scaffold_2368_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9299..9691
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT38_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92378.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K09790 hypothetical protein
scnpilot_p_inoc_scaffold_2368_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9864..11063)
DNA (1200bp) protein (400aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3]
Phosphoglycerate kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT39_9BURK
scnpilot_p_inoc_scaffold_2368_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11130..12836)
DNA (1707bp) protein (569aa)
Sulfatase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT40_9BURK
Sulfatase {ECO:0000313|EMBL:EIK92380.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K03760 phosphoethanolamine transferase
scnpilot_p_inoc_scaffold_2368_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12903..14225)
DNA (1323bp) protein (441aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT41_9BURK
histidine kinase
scnpilot_p_inoc_scaffold_2368_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14222..14938)
DNA (717bp) protein (239aa)
Two component transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT42_9BURK
Two component transcriptional regulator {ECO:0000313|EMBL:EIK92382.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator
scnpilot_p_inoc_scaffold_2368_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15053..15784
DNA (732bp) protein (244aa)
Sulfatase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT43_9BURK
Sulfatase {ECO:0000313|EMBL:EIK92383.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
PAP2 (acid phosphatase) superfamily protein-like protein
scnpilot_p_inoc_scaffold_2368_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15810..16145)
DNA (336bp) protein (112aa)
Branched-chain amino acid transport n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT44_9BURK
Branched-chain amino acid transport {ECO:0000313|EMBL:EIK92384.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2368_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16138..16881)
DNA (744bp) protein (248aa)
AzlC-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT45_9BURK
AzlC-like protein {ECO:0000313|EMBL:EIK92385.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
AzlC-like protein
scnpilot_p_inoc_scaffold_2368_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16878..17837)
DNA (960bp) protein (320aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9]
Methionyl-tRNA formyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT46_9BURK
scnpilot_p_inoc_scaffold_2368_curated_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17874..18368)
DNA (495bp) protein (165aa)
Putative lipoprotein transmembrane n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT47_9BURK
Putative lipoprotein transmembrane {ECO:0000313|EMBL:EIK92387.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
lipoprotein transmembrane
scnpilot_p_inoc_scaffold_2368_curated_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18376..18897)
DNA (522bp) protein (174aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT48_9BURK
scnpilot_p_inoc_scaffold_2368_curated_24
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19171..20403
DNA (1233bp) protein (411aa)
Peptidoglycan-binding LysM n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT49_9BURK
Peptidoglycan-binding LysM {ECO:0000313|EMBL:EIK92389.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
peptidoglycan-binding LysM
scnpilot_p_inoc_scaffold_2368_curated_25
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20409..21515
DNA (1107bp) protein (369aa)
DNA protecting protein dpra n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT50_9BURK
DNA protecting protein dpra {ECO:0000313|EMBL:EIK92390.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
dprA; putative DNA protecting protein DprA
scnpilot_p_inoc_scaffold_2368_curated_26
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21540..23975)
DNA (2436bp) protein (812aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT51_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92391.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2368_curated_27
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24071..25021)
DNA (951bp) protein (317aa)
Protein-export membrane protein SecF n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT52_9BURK
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
secF; preprotein translocase subunit SecF
scnpilot_p_inoc_scaffold_2368_curated_28
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25043..25855)
DNA (813bp) protein (271aa)
Protein translocase subunit SecD n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MT53_9BURK
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD
Displaying 28 items

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