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scnpilot_p_inoc_scaffold_3303_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3303_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..539
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMG5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90405.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_3303_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(508..1404)
DNA (897bp) protein (299aa)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EIK90399.1}; EC=1.1.1.31 {ECO:0000313|EMBL:EIK90399.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60); K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
2-hydroxy-3-oxopropionate reductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMF9_9BURK
scnpilot_p_inoc_scaffold_3303_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1431..2222)
DNA (792bp) protein (264aa)
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.-); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-]
2-dehydro-3-deoxyglucarate aldolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMF8_9BURK
2-dehydro-3-deoxyglucarate aldolase {ECO:0000313|EMBL:EIK90398.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_3303_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2281..3636)
DNA (1356bp) protein (452aa)
D-glucarate dehydratase {ECO:0000313|EMBL:EIK90397.1}; EC=4.2.1.40 {ECO:0000313|EMBL:EIK90397.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
D-glucarate dehydratase (EC:4.2.1.40); K01706 glucarate dehydratase [EC:4.2.1.40]
D-glucarate dehydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMF7_9BURK
scnpilot_p_inoc_scaffold_3303_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3644..4594)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMF6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90396.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3303_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4719..5747)
DNA (1029bp) protein (343aa)
LacI family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMF5_9BURK
LacI family transcriptional regulator {ECO:0000313|EMBL:EIK90395.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
LacI family transcriptional regulator; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
scnpilot_p_inoc_scaffold_3303_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5845..7476
DNA (1632bp) protein (544aa)
Galactarate dehydratase {ECO:0000313|EMBL:EIK90394.1}; EC=4.2.1.42 {ECO:0000313|EMBL:EIK90394.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
galactarate dehydratase (EC:4.2.1.42); K01708 galactarate dehydratase [EC:4.2.1.42]
Galactarate dehydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMF4_9BURK
scnpilot_p_inoc_scaffold_3303_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7510..8484)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMF3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90393.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3303_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8631..9071)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMF2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90392.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3303_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9203..10780)
DNA (1578bp) protein (526aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMF1_9BURK
scnpilot_p_inoc_scaffold_3303_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10830..11468)
DNA (639bp) protein (213aa)
eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase (2-keto-4-hydroxyglutarate aldolase)/2-dehydro-3-deoxyphosphogluconate aldolase (phospho-2-dehydro-3-deoxygluconate aldolase); K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMF0_9BURK
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EIK90390.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_3303_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11488..13311)
DNA (1824bp) protein (608aa)
6-phosphogluconate dehydratase {ECO:0000313|EMBL:EIK90389.1}; EC=4.2.1.12 {ECO:0000313|EMBL:EIK90389.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
6-phosphogluconate dehydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MME9_9BURK
edd; 6-phosphogluconate dehydratase
scnpilot_p_inoc_scaffold_3303_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13438..14136)
DNA (699bp) protein (233aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31); K01057 6-phosphogluconolactonase [EC:3.1.1.31]
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MME8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90388.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_3303_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14141..15607)
DNA (1467bp) protein (489aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MME7_9BURK
glucose-6-phosphate 1-dehydrogenase
scnpilot_p_inoc_scaffold_3303_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15729..16391)
DNA (663bp) protein (221aa)
ABC transporter related protein {ECO:0000313|EMBL:EIK90386.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIK90386.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter related protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MME6_9BURK
ABC transporter
scnpilot_p_inoc_scaffold_3303_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16388..17440)
DNA (1053bp) protein (351aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
tRNA dimethylallyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MME5_9BURK
scnpilot_p_inoc_scaffold_3303_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17437..17799)
DNA (363bp) protein (121aa)
Bcr/CflA subfamily drug resistance transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MME4_9BURK
Bcr/CflA subfamily drug resistance transporter {ECO:0000313|EMBL:EIK90384.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
Displaying 17 items

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