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scnpilot_p_inoc_scaffold_1868_curated

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1868_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..498
DNA (498bp) protein (166aa)
Phenylacetate-CoA oxygenase subunit PaaJ n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR95_9BURK
Phenylacetate-CoA oxygenase subunit PaaJ {ECO:0000313|EMBL:EIK91735.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
phenylacetate-CoA oxygenase, PaaJ subunit; K02612 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
scnpilot_p_inoc_scaffold_1868_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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501..1607
DNA (1107bp) protein (369aa)
Phenylacetate-CoA oxygenase/reductase, PaaK subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR94_9BURK
Phenylacetate-CoA oxygenase/reductase, PaaK subunit {ECO:0000313|EMBL:EIK91734.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region; K02613 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
scnpilot_p_inoc_scaffold_1868_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1627..2052)
DNA (426bp) protein (142aa)
Putative rare lipoprotein A n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR93_9BURK
Putative rare lipoprotein A {ECO:0000313|EMBL:EIK91733.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
rare lipoprotein A; K03642 rare lipoprotein A
scnpilot_p_inoc_scaffold_1868_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2069..2899)
DNA (831bp) protein (277aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20); K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]
Methylenetetrahydrofolate reductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR92_9BURK
scnpilot_p_inoc_scaffold_1868_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2896..3651)
DNA (756bp) protein (252aa)
hypothetical protein; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
Ribosomal RNA methyltransferase RrmJ/FtsJ n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR91_9BURK
Ribosomal RNA methyltransferase RrmJ/FtsJ {ECO:0000313|EMBL:EIK91731.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1868_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3754..5184)
DNA (1431bp) protein (477aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1]
Adenosylhomocysteinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR90_9BURK
scnpilot_p_inoc_scaffold_1868_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5437..6237
DNA (801bp) protein (267aa)
HAD family hydrolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR89_9BURK
HAD family hydrolase {ECO:0000313|EMBL:EIK91729.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K07024
scnpilot_p_inoc_scaffold_1868_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6234..7460
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR88_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91728.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
major facilitator transporter
scnpilot_p_inoc_scaffold_1868_curated_9
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

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7590..8756
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2U351_SALR5
Putative uncharacterized protein {ECO:0000313|EMBL:EGD82045.1}; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
vmp3; metalloproteinase, extracellular matrix glycoprotein VMP3
scnpilot_p_inoc_scaffold_1868_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8844..9224
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR87_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91727.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1868_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9283..9624)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR83_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91723.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1868_curated_12
unknown

Not on your lists

9814..10317
DNA (504bp) protein (168aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1868_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10350..12932)
DNA (2583bp) protein (861aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
2-oxo-acid dehydrogenase E1 subunit, homodimeric type (EC:1.2.4.1); K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR85_9BURK
scnpilot_p_inoc_scaffold_1868_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13044..13502
DNA (459bp) protein (153aa)
AsnC family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR84_9BURK
AsnC family transcriptional regulator {ECO:0000313|EMBL:EIK91724.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
AsnC family transcriptional regulator
scnpilot_p_inoc_scaffold_1868_curated_15
unknown

Not on your lists

comp(13522..14379)
DNA (858bp) protein (286aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1868_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14556..15926)
DNA (1371bp) protein (457aa)
Excinuclease ABC subunit A n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR82_9BURK
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
UvrA family protein; K03701 excinuclease ABC subunit A
scnpilot_p_inoc_scaffold_1868_curated_17
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16464..18419
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FEG9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDT04028.1}; TaxID=396596 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria IOP40-10.;"
multidrug transport protein, mfs family
Displaying 17 items

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